RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 LMCD1Q9NZU5 365 aa16.16■□□□□ 0.18
CCDC84-208ENST00000534656 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
CCDC84-208ENST00000534656 TCF20Q9UGU0 1960 aaKnown RBP16.15■□□□□ 0.18
CCDC84-208ENST00000534656 KLRF2D3W0D1 207 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 ZBTB5O15062 677 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 PPP1R11O60927 126 aaPredicted RBP16.15■□□□□ 0.18
CCDC84-208ENST00000534656 EFCAB14O75071 495 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 PPFIA4O75335 1185 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 GJB5O95377 273 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
CCDC84-208ENST00000534656 IKBKEQ14164 716 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 SEC23AQ15436 765 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 ZNF618Q5T7W0 954 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 MYSM1Q5VVJ2 828 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 SAMD3Q8N6K7 520 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 C1QTNF1Q9BXJ1 281 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 MAD2L2Q9UI95 211 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 PCDHA1Q9Y5I3 950 aa16.15■□□□□ 0.18
CCDC84-208ENST00000534656 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
CCDC84-208ENST00000534656 PGM5Q15124 567 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 HSDL1Q3SXM5 330 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 CELF3Q5SZQ8 465 aaKnown RBP16.14■□□□□ 0.17
CCDC84-208ENST00000534656 VSIG10LQ86VR7 867 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 GDPD5Q8WTR4 605 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 WNT8BQ93098 351 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 SPATA33Q96N06 139 aa16.14■□□□□ 0.17
CCDC84-208ENST00000534656 PRRC2BQ5JSZ5 2229 aaKnown RBP16.14■□□□□ 0.17
CCDC84-208ENST00000534656 PALM3A6NDB9 673 aaPredicted RBP16.13■□□□□ 0.17
CCDC84-208ENST00000534656 GGPS1O95749 300 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 TGFB3P10600 412 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 HOXA13P31271 388 aaPredicted RBP16.13■□□□□ 0.17
CCDC84-208ENST00000534656 ERVK-21P61565 698 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 SP2Q02086 613 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 HIC1Q14526 733 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 MBTPS1Q14703 1052 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 CYB5R4Q7L1T6 521 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 TGS1Q96RS0 853 aaKnown RBP16.13■□□□□ 0.17
CCDC84-208ENST00000534656 SUGCTQ9HAC7 445 aa16.13■□□□□ 0.17
CCDC84-208ENST00000534656 COL4A4P53420 1690 aaPredicted RBP16.12■□□□□ 0.17
CCDC84-208ENST00000534656 MYH6P13533 1939 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 LINC01553A4QN01 128 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 SORBS3O60504 671 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 LGR5O75473 907 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 TRAF1Q13077 416 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 IL31RAQ8NI17 732 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 C16orf70Q9BSU1 422 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 IL25Q9H293 177 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 EMSYQ7Z589 1322 aa16.12■□□□□ 0.17
CCDC84-208ENST00000534656 GCOM1H8Y6P7 765 aaPredicted RBP16.11■□□□□ 0.17
CCDC84-208ENST00000534656 POLR2MP0CAP2 368 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
CCDC84-208ENST00000534656 CCND2P30279 289 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 SLC35G1Q2M3R5 365 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 DBF4BQ8NFT6 615 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 PIGSQ96S52 555 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 RIOX1Q9H6W3 641 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 MLXIPQ9HAP2 919 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 INSL6Q9Y581 213 aa16.11■□□□□ 0.17
CCDC84-208ENST00000534656 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 C17orf102A2RUQ5 167 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 RSPH10B2B2RC85 870 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 RSPH10BP0C881 870 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 THPOP40225 353 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
CCDC84-208ENST00000534656 GRM4Q14833 912 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC84-208ENST00000534656 HOMER1Q86YM7 354 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 GPKOWQ92917 476 aaPredicted RBP eCLIP16.1■□□□□ 0.17
CCDC84-208ENST00000534656 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
CCDC84-208ENST00000534656 EPHX3Q9H6B9 360 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 BDP1A6H8Y1 2624 aa16.1■□□□□ 0.17
CCDC84-208ENST00000534656 H3BRB1 525 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 AMHP03971 560 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 HOXC8P31273 242 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 PLA2G5P39877 138 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 TRDNQ13061 729 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 PLEKHG4Q58EX7 1191 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 FCHSD1Q86WN1 690 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
CCDC84-208ENST00000534656 TUT1Q9H6E5 874 aaKnown RBP16.09■□□□□ 0.17
CCDC84-208ENST00000534656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.08■□□□□ 0.16
CCDC84-208ENST00000534656 PNMA6FA0A0J9YX94 578 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 IFIT3O14879 490 aaKnown RBP16.08■□□□□ 0.16
CCDC84-208ENST00000534656 CYTH3O43739 400 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 LGALS2P05162 132 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 HTRA4P83105 476 aaPredicted RBP16.08■□□□□ 0.16
CCDC84-208ENST00000534656 MYOCDQ8IZQ8 938 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 FBXO22Q8NEZ5 403 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 EXOC6Q8TAG9 804 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 C17orf80Q9BSJ5 609 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 LRFN3Q9BTN0 628 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
CCDC84-208ENST00000534656 BCAS3Q9H6U6 928 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms