RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 TRANK1O15050 2925 aa13.47□□□□□ -0.25
CTNND1-238ENST00000534647 RFXAPO00287 272 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 KDM4AO75164 1064 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 HOXD8P13378 290 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-238ENST00000534647 GDF6Q6KF10 455 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-238ENST00000534647 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 FBXO11Q86XK2 927 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 ENAHQ8N8S7 591 aaPredicted RBP13.46□□□□□ -0.25
CTNND1-238ENST00000534647 RILPL2Q969X0 211 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 DSCC1Q9BVC3 393 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 CPVLQ9H3G5 476 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 JMJD4Q9H9V9 463 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 GTF2IRD1Q9UHL9 959 aa13.46□□□□□ -0.25
CTNND1-238ENST00000534647 ABHD14A-ACY1A0A1B0GW23 586 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 EPOPA6NHQ4 379 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 HAS3O00219 553 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 HIP1O00291 1037 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 DPYSL4O14531 572 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 EFCAB14O75071 495 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 NR3C2P08235 984 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
CTNND1-238ENST00000534647 KCNJ6P48051 423 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 HSD17B4P51659 736 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 WDR5P61964 334 aaKnown RBP13.45□□□□□ -0.26
CTNND1-238ENST00000534647 TFF2Q03403 129 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 LAMC2Q13753 1193 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 ARHGEF16Q5VV41 709 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 CNKSR3Q6P9H4 555 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 KCNV1Q6PIU1 500 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 LRRC8DQ7L1W4 858 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 PPTC7Q8NI37 304 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 PPP1R13LQ8WUF5 828 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
CTNND1-238ENST00000534647 MTMR8Q96EF0 704 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 KATNAL1Q9BW62 490 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 KRT23Q9C075 422 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
CTNND1-238ENST00000534647 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
CTNND1-238ENST00000534647 TLL1O43897 1013 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 LPXNO60711 386 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 F2P00734 622 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 CKBP12277 381 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 PTK7Q13308 1070 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 STOX1Q6ZVD7 989 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 CHD1LQ86WJ1 897 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 MICALL1Q8N3F8 863 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 C7orf31Q8N865 590 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 ARNTL2Q8WYA1 636 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 C1QTNF1Q9BXJ1 281 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 PXMP2Q9NR77 195 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 HDAC6Q9UBN7 1215 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 CTNNA3Q9UI47 895 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 SCN5AQ14524 2016 aa13.44□□□□□ -0.26
CTNND1-238ENST00000534647 PRRC2BQ5JSZ5 2229 aaKnown RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 B4E1Z4 1266 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 OPLAHO14841 1288 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 NBNO60934 754 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 RGS20O76081 388 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 TGFB3P10600 412 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 PSEN2P49810 448 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 KCNQ1P51787 676 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 NUCB1Q02818 461 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 GRB10Q13322 594 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 TRIM71Q2Q1W2 868 aaKnown RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 PPP1R15BQ5SWA1 713 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 FOXD4L5Q5VV16 416 aaPredicted RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 TRAF7Q6Q0C0 670 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 CWC27Q6UX04 472 aaKnown RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 VSIG10LQ86VR7 867 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 FOXD4L4Q8WXT5 416 aaPredicted RBP13.43□□□□□ -0.26
CTNND1-238ENST00000534647 HLA-CQ95604 372 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 RAD9AQ99638 391 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 CERS4Q9HA82 394 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
CTNND1-238ENST00000534647 TANC1Q9C0D5 1861 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 GJB5O95377 273 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 EIF2AK2P19525 551 aaKnown RBP13.42□□□□□ -0.26
CTNND1-238ENST00000534647 RBM25P49756 843 aaKnown RBP13.42□□□□□ -0.26
CTNND1-238ENST00000534647 ERVK-21P61565 698 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 TRAF1Q13077 416 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 IKBKEQ14164 716 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 SKIV2LQ15477 1246 aaKnown RBP13.42□□□□□ -0.26
CTNND1-238ENST00000534647 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 CHST3Q7LGC8 479 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
CTNND1-238ENST00000534647 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 TET1Q8NFU7 2136 aa13.42□□□□□ -0.26
CTNND1-238ENST00000534647 PALM3A6NDB9 673 aaPredicted RBP13.41□□□□□ -0.26
CTNND1-238ENST00000534647 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
CTNND1-238ENST00000534647 ZBTB5O15062 677 aa13.41□□□□□ -0.26
CTNND1-238ENST00000534647 CFBP00751 764 aa13.41□□□□□ -0.26
CTNND1-238ENST00000534647 CHMP4BP1P59074 171 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms