RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	BAHD1	Q8TBE0	780 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PPM1E	Q8WY54	764 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF669	Q96BR6	464 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ERO1A	Q96HE7	468 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TTYH1	Q9H313	450 aa	Predicted RBP	6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TMEM260	Q9NX78	707 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	MKL2	Q9ULH7	1088 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	VPS8	Q8N3P4	1428 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ZNF462	Q96JM2	2506 aa		6.23	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CACNA1S	Q13698	1873 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SUSD5	O60279	629 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	RNGTT	O60942	597 aa	Known RBP	6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	TM4SF4	P48230	202 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PMS1	P54277	932 aa	Known RBP	6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CAP1	Q01518	475 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLC10A6	Q3KNW5	377 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	GNPTAB	Q3T906	1256 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ANKRD34A	Q69YU3	496 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	FDX2	Q6P4F2	183 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	EEPD1	Q7L9B9	569 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SMYD4	Q8IYR2	804 aa	Predicted RBP	6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	C7orf61	Q8IZ16	206 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	KCT2	Q8NC54	265 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	THAP3	Q8WTV1	239 aa	Predicted RBP	6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PPP1R13L	Q8WUF5	828 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CCDC74B	Q96LY2	380 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SLC6A18	Q96N87	628 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	SUSD2	Q9UGT4	822 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	PGAP2	Q9UHJ9	254 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	ALPK3	Q96L96	1907 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	COL4A5	P29400	1685 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	DNAH14	Q0VDD8	3507 aa		6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	COL11A2	P13942	1736 aa	Predicted RBP	6.22	□□□□□ -1.41
ECHDC1-223	ENST00000534442	CDC45	O75419	566 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	HMGB1	P09429	215 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	TM4SF1	P30408	202 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PREP	P48147	710 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	SSRP1	Q08945	709 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442		Q6ZS46	218 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ZCRB1	Q8TBF4	217 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CYB5D2	Q8WUJ1	264 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	APPBP2	Q92624	585 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	DHRS1	Q96LJ7	313 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	FOXQ1	Q9C009	403 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ACSS3	Q9H6R3	686 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PIDD1	Q9HB75	910 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	SUCO	Q9UBS9	1254 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	NRXN2	Q9P2S2	1712 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ANKRD26	Q9UPS8	1709 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PTPRZ1	P23471	2315 aa	Predicted RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CNTNAP5	Q8WYK1	1306 aa		6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	USP42	Q9H9J4	1324 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC1-223	ENST00000534442	SLX4	Q8IY92	1834 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	NUP155	O75694	1391 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	TJP1	Q07157	1748 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442		C9IYK1	514 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ADCY3	O60266	1144 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CLSTN1	O94985	981 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	FAM153B	P0C7A2	387 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PRRT3	Q5FWE3	981 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	TDRD10	Q5VZ19	366 aa	Known RBP	6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ARMCX6	Q7L4S7	300 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	HOMER1	Q86YM7	354 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	XAGE3	Q8WTP9	111 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	LENG1	Q96BZ8	264 aa	Predicted RBP	6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	GPATCH3	Q96I76	525 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	SPATA9	Q9BWV2	254 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	AKTIP	Q9H8T0	292 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	SSU72	Q9NP77	194 aa	Known RBP	6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	FAM86C1	Q9NVL1	165 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PCOLCE2	Q9UKZ9	415 aa		6.2	□□□□□ -1.42
ECHDC1-223	ENST00000534442	COL15A1	P39059	1388 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	KDM3B	Q7LBC6	1761 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	KRBA1	A5PL33	1030 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PIK3R2	O00459	728 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PPM1G	O15355	546 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	LRIG2	O94898	1065 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	TP53	P04637	393 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	GBP1	P32455	592 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	IARS	P41252	1262 aa	Known RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	TKFC	Q3LXA3	575 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	BBS9	Q3SYG4	887 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CDPF1	Q6NVV7	123 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	DNAJB8	Q8NHS0	232 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	UBL7	Q96S82	380 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	EPN3	Q9H201	632 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	GPRC5D	Q9NZD1	345 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	NOP53	Q9NZM5	478 aa	Known RBP	6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	ASPM	Q8IZT6	3477 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	MYO15A	Q9UKN7	3530 aa		6.19	□□□□□ -1.42
ECHDC1-223	ENST00000534442	PIK3C2G	O75747	1445 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	RBAK-RBAKDN	I3L0D1	243 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CBFA2T2	O43439	604 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	WIPF1	O43516	503 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	CLEC3A	O75596	197 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	RPS6KA4	O75676	772 aa		6.18	□□□□□ -1.42
ECHDC1-223	ENST00000534442	KRT38	O76015	456 aa		6.18	□□□□□ -1.42

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