RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 SAFBQ15424 915 aaKnown RBP eCLIP27.56■■■□□ 2
SIPA1-210ENST00000534406 DIS3L2Q8IYB7 885 aaKnown RBP27.56■■■□□ 2
SIPA1-210ENST00000534406 COPS5Q92905 334 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 MXRA8Q9BRK3 442 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 JADE2Q9NQC1 790 aa27.56■■■□□ 2
SIPA1-210ENST00000534406 MYADML2A6NDP7 307 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 SPATA31C2B4DYI2 1134 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 UBA1P22314 1058 aaKnown RBP27.55■■■□□ 2
SIPA1-210ENST00000534406 MNX1P50219 401 aaPredicted RBP27.55■■■□□ 2
SIPA1-210ENST00000534406 NKX3-2P78367 333 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 SEMA3FQ13275 785 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 MTMR1Q13613 665 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 CEP55Q53EZ4 464 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 FBXO18Q8NFZ0 1043 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 TBCKQ8TEA7 893 aa27.55■■■□□ 2
SIPA1-210ENST00000534406 DIS3LQ8TF46 1054 aaKnown RBP27.55■■■□□ 2
SIPA1-210ENST00000534406 NR5A1Q13285 461 aa27.54■■■□□ 2
SIPA1-210ENST00000534406 FSCN1Q16658 493 aaKnown RBP27.54■■■□□ 2
SIPA1-210ENST00000534406 NIPA1Q7RTP0 329 aa27.54■■■□□ 2
SIPA1-210ENST00000534406 UBE2Q1Q7Z7E8 422 aa27.54■■■□□ 2
SIPA1-210ENST00000534406 KLHDC9Q8NEP7 349 aa27.54■■■□□ 2
SIPA1-210ENST00000534406 ARHGAP1Q07960 439 aa27.53■■■□□ 2
SIPA1-210ENST00000534406 PIK3AP1Q6ZUJ8 805 aa27.53■■■□□ 2
SIPA1-210ENST00000534406 TNFRSF25Q93038 417 aa27.53■■■□□ 2
SIPA1-210ENST00000534406 INTS4Q96HW7 963 aaKnown RBP27.53■■■□□ 2
SIPA1-210ENST00000534406 BTBD18B2RXH4 712 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 CTAGE5O15320 804 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 GGPS1O95749 300 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 CPT1AP50416 773 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 USP11P51784 963 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 SETQ01105 290 aaPredicted RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 INF2Q27J81 1249 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 BRDTQ58F21 947 aaPredicted RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 GNASQ5JWF2 1037 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 NECAB2Q7Z6G3 386 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 DHX37Q8IY37 1157 aaKnown RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 PCSK9Q8NBP7 692 aaKnown RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 EMID1Q96A84 441 aaPredicted RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 PAWRQ96IZ0 340 aaKnown RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 TSEN34Q9BSV6 310 aaKnown RBP27.52■■■□□ 2
SIPA1-210ENST00000534406 DOCK5Q9H7D0 1870 aa27.52■■■□□ 2
SIPA1-210ENST00000534406 FAM86B1E9PN63 330 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 MEIS1O00470 390 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 MAFGO15525 162 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 FAM86B2P0C5J1 330 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 CIITAP33076 1130 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 IRX5P78411 483 aaPredicted RBP27.51■■□□□ 1.99
SIPA1-210ENST00000534406 BEX3Q00994 111 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 LAMC2Q13753 1193 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 NEDD9Q14511 834 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 CELF3Q5SZQ8 465 aaKnown RBP27.51■■□□□ 1.99
SIPA1-210ENST00000534406 CYP2W1Q8TAV3 490 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 SENP7Q9BQF6 1050 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 C11orf49Q9H6J7 331 aa27.51■■□□□ 1.99
SIPA1-210ENST00000534406 MOXD2PA6NHM9 499 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 ZEB2O60315 1214 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 SP2Q02086 613 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 CCSAPQ6IQ19 270 aaPredicted RBP27.5■■□□□ 1.99
SIPA1-210ENST00000534406 PLA2G4DQ86XP0 818 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 GIMAP8Q8ND71 665 aaPredicted RBP27.5■■□□□ 1.99
SIPA1-210ENST00000534406 KCNH7Q9NS40 1196 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 PHF24Q9UPV7 400 aa27.5■■□□□ 1.99
SIPA1-210ENST00000534406 IGLV3-22A0A075B6J6 115 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 COL6A1P12109 1028 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 KCNA2P16389 499 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 GNL2Q13823 731 aaKnown RBP27.49■■□□□ 1.99
SIPA1-210ENST00000534406 KCNA10Q16322 511 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 NEK8Q86SG6 692 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 AFG1LQ8WV93 481 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 FOXP1Q9H334 677 aaPredicted RBP27.49■■□□□ 1.99
SIPA1-210ENST00000534406 MLXIPQ9HAP2 919 aa27.49■■□□□ 1.99
SIPA1-210ENST00000534406 A6NJR5 290 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 H3BQV1 296 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 SORBS3O60504 671 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 RGS19P49795 217 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 ACLYP53396 1101 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 PRR16Q569H4 304 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 EARS2Q5JPH6 523 aaKnown RBP27.48■■□□□ 1.99
SIPA1-210ENST00000534406 IFFO2Q5TF58 517 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 MYSM1Q5VVJ2 828 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 MOXD1Q6UVY6 613 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 METTL7BQ6UX53 244 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 PPTC7Q8NI37 304 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 PKD2L1Q9P0L9 805 aa27.48■■□□□ 1.99
SIPA1-210ENST00000534406 FAM205CA6NFA0 338 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 EDIL3O43854 480 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 ASGR1P07306 291 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 ARP10275 920 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 LETM2Q2VYF4 491 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 SPATA33Q96N06 139 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 NAP1L4Q99733 375 aaKnown RBP27.47■■□□□ 1.99
SIPA1-210ENST00000534406 AGO4Q9HCK5 861 aaKnown RBP27.47■■□□□ 1.99
SIPA1-210ENST00000534406 FOXD4L1Q9NU39 408 aa27.47■■□□□ 1.99
SIPA1-210ENST00000534406 A0A1W2PQ45 241 aaPredicted RBP27.46■■□□□ 1.99
SIPA1-210ENST00000534406 A0A1W2PQY0 241 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 ATP9AO75110 1047 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 TDP2O95551 362 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 HSP90AA1P07900 732 aaKnown RBP27.46■■□□□ 1.99
SIPA1-210ENST00000534406 MMP3P08254 477 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 GCFC2P16383 781 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms