RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SPIRE1Q08AE8 756 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 TMEM62Q0P6H9 643 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 TM4SF20Q53R12 229 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 HABP4Q5JVS0 413 aaKnown RBP9.24□□□□□ -0.93
CASP4-213ENST00000534356 STEAP3Q658P3 488 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 C16orf59Q7L2K0 433 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 AP5M1Q9H0R1 490 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 BCAS3Q9H6U6 928 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 SLC6A20Q9NP91 592 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 CBLCQ9ULV8 474 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 MYOCOSA0A1B0GUC4 107 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 CCDC66A2RUB6 948 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 FAM83GA6ND36 823 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 HRKO00198 91 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 TADA3O75528 432 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 ST5P78524 1137 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 EMC4Q5J8M3 183 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 ZC3H14Q6PJT7 736 aaKnown RBP9.23□□□□□ -0.93
CASP4-213ENST00000534356 ZNF662Q6ZS27 426 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 TMC6Q7Z403 805 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 LRRTM3Q86VH5 581 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 IGSF22Q8N9C0 903 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 CATSPERZQ9NTU4 200 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 PALD1Q9ULE6 856 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 SBNO2Q9Y2G9 1366 aa9.23□□□□□ -0.93
CASP4-213ENST00000534356 TCRBV5S4A2TA0A5A2 114 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 HGSO14964 777 aaPredicted RBP9.22□□□□□ -0.93
CASP4-213ENST00000534356 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
CASP4-213ENST00000534356 CHRNA2Q15822 529 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 FAM47CQ5HY64 1035 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 ZCCHC8Q6NZY4 707 aaKnown RBP9.22□□□□□ -0.93
CASP4-213ENST00000534356 CNNM4Q6P4Q7 775 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 MILR1Q7Z6M3 343 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 OSTM1Q86WC4 334 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 FAM177A1Q8N128 213 aaPredicted RBP9.22□□□□□ -0.93
CASP4-213ENST00000534356 TSPAN17Q96FV3 270 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 CELF4Q9BZC1 486 aaKnown RBP9.22□□□□□ -0.93
CASP4-213ENST00000534356 MCOLN1Q9GZU1 580 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 SAMD15Q9P1V8 674 aa9.22□□□□□ -0.93
CASP4-213ENST00000534356 B4E1Z4 1266 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 KRIT1O00522 736 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 GSTA4O15217 222 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 ZBTB7AO95365 584 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 PDE6AP16499 860 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 TAF7LQ5H9L4 462 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 TARS2Q9BW92 718 aaKnown RBP9.21□□□□□ -0.94
CASP4-213ENST00000534356 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.94
CASP4-213ENST00000534356 ZNF652Q9Y2D9 606 aa9.21□□□□□ -0.94
CASP4-213ENST00000534356 A0A087X0B3 334 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 PEX10O60683 326 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 AMY2AP04746 511 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 JMJD7P0C870 316 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 AMY2BP19961 511 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 ZNF200P98182 395 aaPredicted RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 SLC9A5Q14940 896 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 CRY1Q16526 586 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 OLFML2BQ68BL8 750 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 OVCH1Q7RTY7 1134 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 DDX53Q86TM3 631 aaKnown RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 RBM12BQ8IXT5 1001 aaKnown RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 CISD2Q8N5K1 135 aaKnown RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 UHMK1Q8TAS1 419 aaKnown RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 SH3RF2Q8TEC5 729 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 DDX1Q92499 740 aaKnown RBP9.2□□□□□ -0.94
CASP4-213ENST00000534356 SMOC1Q9H4F8 434 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 CC2D2AQ9P2K1 1620 aa9.2□□□□□ -0.94
CASP4-213ENST00000534356 SLC27A2O14975 620 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
CASP4-213ENST00000534356 NPTXRO95502 500 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 KRT15P19012 456 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 MASP1P48740 699 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 JAM2P57087 298 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 GPR19Q15760 415 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 PIK3R6Q5UE93 754 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 CDCA2Q69YH5 1023 aaPredicted RBP9.19□□□□□ -0.94
CASP4-213ENST00000534356 ARHGAP36Q6ZRI8 547 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 CNTD2Q9H8S5 307 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 SIRT5Q9NXA8 310 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 MYOTQ9UBF9 498 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 MBD1Q9UIS9 605 aaPredicted RBP9.19□□□□□ -0.94
CASP4-213ENST00000534356 DSEQ9UL01 958 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 PCDHB4Q9Y5E5 795 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
CASP4-213ENST00000534356 TCRBV5S2A0A599 114 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 M0R2C6 588 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 FLT3P36888 993 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 LACTBP83111 547 aaPredicted RBP9.18□□□□□ -0.94
CASP4-213ENST00000534356 CFAP100Q494V2 611 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 TMEM177Q53S58 311 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 CYP4F22Q6NT55 531 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
CASP4-213ENST00000534356 FBXO15Q8NCQ5 510 aaPredicted RBP9.18□□□□□ -0.94
CASP4-213ENST00000534356 ALG3Q92685 438 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 SGPP1Q9BX95 441 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 CD244Q9BZW8 370 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 MTFR1LQ9H019 292 aa9.18□□□□□ -0.94
CASP4-213ENST00000534356 SMURF1Q9HCE7 757 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms