RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 COPS5Q92905 334 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 SPATA33Q96N06 139 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 V9GY48 417 aaPredicted RBP17.73■□□□□ 0.43
UBXN1-217ENST00000534176 SCN10AQ9Y5Y9 1956 aa17.73■□□□□ 0.43
UBXN1-217ENST00000534176 GRIN2DO15399 1336 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 ESYT2A0FGR8 921 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 SPATA31C2B4DYI2 1134 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 PITPNM1O00562 1244 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 NOP56O00567 594 aaKnown RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 RGS20O76081 388 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 PARNO95453 639 aaKnown RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 GGPS1O95749 300 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 GNA11P29992 359 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 ADCY7P51828 1080 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 PFKFB3Q16875 520 aaPredicted RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 NBPF20Q3BBV1 942 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 METTL7BQ6UX53 244 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 RPUSD2Q8IZ73 545 aaKnown RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 BICD2Q8TD16 824 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 ZNF274Q96GC6 653 aaPredicted RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
UBXN1-217ENST00000534176 NOD1Q9Y239 953 aa17.72■□□□□ 0.43
UBXN1-217ENST00000534176 PRPF3O43395 683 aaKnown RBP17.71■□□□□ 0.43
UBXN1-217ENST00000534176 B4GALT4O60513 344 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 F2P00734 622 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 SCG2P13521 617 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 UBA1P22314 1058 aaKnown RBP17.71■□□□□ 0.43
UBXN1-217ENST00000534176 RFC2P35250 354 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 PSMC6P62333 389 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
UBXN1-217ENST00000534176 BFSP2Q13515 415 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 FAM47CQ5HY64 1035 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 WWC2Q6AWC2 1192 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 FAM109BQ6ICB4 259 aaPredicted RBP17.71■□□□□ 0.43
UBXN1-217ENST00000534176 RAB11FIP4Q86YS3 637 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 TRIM22Q8IYM9 498 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 CCDC148Q8NFR7 591 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 IL31RAQ8NI17 732 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 CAGE1Q8TC20 777 aa17.71■□□□□ 0.43
UBXN1-217ENST00000534176 FAM217BQ9NTX9 383 aaPredicted RBP17.71■□□□□ 0.43
UBXN1-217ENST00000534176 SMCO2A6NFE2 343 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 IFNAR1P17181 557 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 CDC27P30260 824 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 ADD1P35611 737 aaKnown RBP17.7■□□□□ 0.42
UBXN1-217ENST00000534176 SMAD3P84022 425 aaKnown RBP17.7■□□□□ 0.42
UBXN1-217ENST00000534176 C7orf31Q8N865 590 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 C6orf50Q9HD87 102 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 ZNF215Q9UL58 517 aaPredicted RBP17.7■□□□□ 0.42
UBXN1-217ENST00000534176 PCDHA6Q9UN73 950 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 PCDHA8Q9Y5H6 950 aa17.7■□□□□ 0.42
UBXN1-217ENST00000534176 STXBP3O00186 592 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 CPLX1O14810 134 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 CDKL5O76039 1030 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 ITGB8P26012 769 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 RETREG2Q8NC44 543 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 GPKOWQ92917 476 aaPredicted RBP eCLIP17.69■□□□□ 0.42
UBXN1-217ENST00000534176 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
UBXN1-217ENST00000534176 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
UBXN1-217ENST00000534176 NOC4LQ9BVI4 516 aaKnown RBP17.69■□□□□ 0.42
UBXN1-217ENST00000534176 ZMYND12Q9H0C1 365 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
UBXN1-217ENST00000534176 TMEM265A0A087WTH1 108 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 hCG_1642624A0A1W2PR95 340 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 GNAT1P11488 350 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 CPA1P15085 419 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 PTGS1P23219 599 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 PDIA3P30101 505 aaKnown RBP17.68■□□□□ 0.42
UBXN1-217ENST00000534176 MTMR1Q13613 665 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 SHHQ15465 462 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 HSDL1Q3SXM5 330 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 C22orf23Q9BZE7 217 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 PPP1R12CQ9BZL4 782 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 TRPV6Q9H1D0 765 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 PDRG1Q9NUG6 133 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 GTF2IRD1Q9UHL9 959 aa17.68■□□□□ 0.42
UBXN1-217ENST00000534176 HAS3O00219 553 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 PSEN2P49810 448 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 MFSD10Q14728 455 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 PTGISQ16647 500 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 NIPA1Q7RTP0 329 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 AFAP1L1Q8TED9 768 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 KAT2BQ92831 832 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 JADE2Q9NQC1 790 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 RTEL1Q9NZ71 1219 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 UBIAD1Q9Y5Z9 338 aa17.67■□□□□ 0.42
UBXN1-217ENST00000534176 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-217ENST00000534176 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-217ENST00000534176 H3BRB1 525 aa17.66■□□□□ 0.42
UBXN1-217ENST00000534176 CSF2RAP15509 400 aa17.66■□□□□ 0.42
UBXN1-217ENST00000534176 SREBF1P36956 1147 aa17.66■□□□□ 0.42
UBXN1-217ENST00000534176 CLK2P49760 499 aaKnown RBP17.66■□□□□ 0.42
UBXN1-217ENST00000534176 SP2Q02086 613 aa17.66■□□□□ 0.42
UBXN1-217ENST00000534176 RBL2Q08999 1139 aa17.66■□□□□ 0.42
UBXN1-217ENST00000534176 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
UBXN1-217ENST00000534176 UBE2SQ16763 222 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms