RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 SCLYQ96I15 445 aa21.82■■□□□ 1.08
LRRK1-210ENST00000534045 JAKMIP1Q96N16 626 aaKnown RBP21.82■■□□□ 1.08
LRRK1-210ENST00000534045 SZT2Q5T011 3432 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 PSMA5P28066 241 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 PSEN2P49810 448 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 OTOP2Q7RTS6 562 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 EHMT1Q9H9B1 1298 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 BRPF3Q9ULD4 1205 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 STXBP5LQ9Y2K9 1186 aa21.81■■□□□ 1.08
LRRK1-210ENST00000534045 V9GY48 417 aaPredicted RBP21.81■■□□□ 1.08
LRRK1-210ENST00000534045 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 CCDC196A0A1B0GTZ2 297 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 MEIS2O14770 477 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 FIBPO43427 364 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 UBA1P22314 1058 aaKnown RBP21.8■■□□□ 1.08
LRRK1-210ENST00000534045 HSPA4P34932 840 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 MRPS9P82933 396 aaKnown RBP21.8■■□□□ 1.08
LRRK1-210ENST00000534045 SP2Q02086 613 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 MFSD10Q14728 455 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 KIAA0753Q2KHM9 967 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 PCNX4Q63HM2 1172 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 DEFB128Q7Z7B8 93 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 WNT8AQ9H1J5 351 aa21.8■■□□□ 1.08
LRRK1-210ENST00000534045 ZBBXA8MT70 800 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 SPATA31C2B4DYI2 1134 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 PFKMP08237 780 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 ZNF286BP0CG31 522 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 ACTN1P12814 892 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 NAPAP54920 295 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 HSDL1Q3SXM5 330 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 Q6ZUG5 572 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 HERVK_113Q902F9 699 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 KAT2BQ92831 832 aa21.79■■□□□ 1.08
LRRK1-210ENST00000534045 INPP4AQ96PE3 977 aaPredicted RBP21.79■■□□□ 1.08
LRRK1-210ENST00000534045 FTOQ9C0B1 505 aaKnown RBP eCLIP21.79■■□□□ 1.08
LRRK1-210ENST00000534045 SCN10AQ9Y5Y9 1956 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 PITPNM1O00562 1244 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 ICAM3P32942 547 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 RFC2P35250 354 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 METAP2P50579 478 aaKnown RBP eCLIP21.78■■□□□ 1.08
LRRK1-210ENST00000534045 GDF6Q6KF10 455 aaPredicted RBP21.78■■□□□ 1.08
LRRK1-210ENST00000534045 CYFIP1Q7L576 1253 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 SESTD1Q86VW0 696 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 GIMAP8Q8ND71 665 aaPredicted RBP21.78■■□□□ 1.08
LRRK1-210ENST00000534045 SLC17A8Q8NDX2 589 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 GPKOWQ92917 476 aaPredicted RBP eCLIP21.78■■□□□ 1.08
LRRK1-210ENST00000534045 CDHR1Q96JP9 859 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 MSRAQ9UJ68 235 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 SNX14Q9Y5W7 946 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 SLC4A7Q9Y6M7 1214 aa21.78■■□□□ 1.08
LRRK1-210ENST00000534045 CPA1P15085 419 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 DNAJB2P25686 324 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 UBE2SQ16763 222 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 CAGE1Q8TC20 777 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 USP26Q9BXU7 913 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 GTF2IRD1Q9UHL9 959 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 PCDHA6Q9UN73 950 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 PCDHA8Q9Y5H6 950 aa21.77■■□□□ 1.08
LRRK1-210ENST00000534045 FRMPD4Q14CM0 1322 aa21.77■■□□□ 1.07
LRRK1-210ENST00000534045 TMEM265A0A087WTH1 108 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 F2P00734 622 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 IQCF3P0C7M6 154 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 RCAN1P53805 252 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 AKAP17AQ02040 695 aaKnown RBP21.76■■□□□ 1.07
LRRK1-210ENST00000534045 APOBRQ0VD83 1088 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 KCNB2Q92953 911 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 BRF1Q92994 677 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 TIFAQ96CG3 184 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 GLT8D2Q9H1C3 349 aa21.76■■□□□ 1.07
LRRK1-210ENST00000534045 GRXCR1A8MXD5 290 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 H3BRB1 525 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 hCG_1984214I3L0E3 225 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 SP4Q02446 784 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 RASIP1Q5U651 963 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 ERICH6BQ5W0A0 696 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 WWC2Q6AWC2 1192 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 ZNF713Q8N859 430 aaPredicted RBP21.75■■□□□ 1.07
LRRK1-210ENST00000534045 GPRASP2Q96D09 838 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 CDX2Q99626 313 aaPredicted RBP21.75■■□□□ 1.07
LRRK1-210ENST00000534045 SENP7Q9BQF6 1050 aa21.75■■□□□ 1.07
LRRK1-210ENST00000534045 TUT1Q9H6E5 874 aaKnown RBP21.75■■□□□ 1.07
LRRK1-210ENST00000534045 SMCO2A6NFE2 343 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 FOSP01100 380 aaPredicted RBP21.74■■□□□ 1.07
LRRK1-210ENST00000534045 CENPBP07199 599 aaPredicted RBP21.74■■□□□ 1.07
LRRK1-210ENST00000534045 HOXD8P13378 290 aaPredicted RBP21.74■■□□□ 1.07
LRRK1-210ENST00000534045 RPS6KB1P23443 525 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 ADD1P35611 737 aaKnown RBP21.74■■□□□ 1.07
LRRK1-210ENST00000534045 ADCY7P51828 1080 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 RAB30Q15771 203 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 PPP1R18Q6NYC8 613 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 AFAP1L1Q8TED9 768 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 GUCD1Q96NT3 240 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 ZNF576Q9H609 170 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 CXXC1Q9P0U4 656 aaPredicted RBP21.74■■□□□ 1.07
LRRK1-210ENST00000534045 CNTNAP5Q8WYK1 1306 aa21.74■■□□□ 1.07
LRRK1-210ENST00000534045 DOCK5Q9H7D0 1870 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms