RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 A0A0C4DFX4 3053 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 SPDYE3A6NKU9 549 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 HAS3O00219 553 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 TLR3O15455 904 aaKnown RBP11.29□□□□□ -0.6
NUP98-220ENST00000533346 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
NUP98-220ENST00000533346 PTGS1P23219 599 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 NAPAP54920 295 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 SP2Q02086 613 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 SEMA3FQ13275 785 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 NEDD9Q14511 834 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 LRIT3Q3SXY7 679 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 C8orf34Q49A92 452 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 NLRX1Q86UT6 975 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 GIMAP8Q8ND71 665 aaPredicted RBP11.29□□□□□ -0.6
NUP98-220ENST00000533346 PIBF1Q8WXW3 757 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
NUP98-220ENST00000533346 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 EHMT1Q9H9B1 1298 aa11.29□□□□□ -0.6
NUP98-220ENST00000533346 DOCK5Q9H7D0 1870 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SEC24BO95487 1268 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 F2P00734 622 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 TIMP1P01033 207 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 CYP3A4P08684 503 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SUPT20HL2P0C7V6 817 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SYN1P17600 705 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
NUP98-220ENST00000533346 GNA11P29992 359 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SREBF1P36956 1147 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 ADCY7P51828 1080 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 DGKDQ16760 1214 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 GPR153Q6NV75 609 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 METTL7BQ6UX53 244 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 NIPA1Q7RTP0 329 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 DHX37Q8IY37 1157 aaKnown RBP11.28□□□□□ -0.6
NUP98-220ENST00000533346 TDHQ8IZJ6 230 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 KAT2BQ92831 832 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 UPF3BQ9BZI7 483 aaKnown RBP11.28□□□□□ -0.6
NUP98-220ENST00000533346 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 TMEM39AQ9NV64 488 aa11.28□□□□□ -0.6
NUP98-220ENST00000533346 SOX1O00570 391 aaPredicted RBP11.27□□□□□ -0.61
NUP98-220ENST00000533346 PFKFB2O60825 505 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 PQBP1O60828 265 aaKnown RBP11.27□□□□□ -0.61
NUP98-220ENST00000533346 DEXIO95424 95 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 ITGB5P18084 799 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 ITGB8P26012 769 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
NUP98-220ENST00000533346 HSDL1Q3SXM5 330 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 GALNT17Q6IS24 598 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 MFSD5Q6N075 450 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
NUP98-220ENST00000533346 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 LBHD1Q9BQE6 289 aaPredicted RBP11.27□□□□□ -0.61
NUP98-220ENST00000533346 KATNAL1Q9BW62 490 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 C6orf50Q9HD87 102 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 STK36Q9NRP7 1315 aa11.27□□□□□ -0.61
NUP98-220ENST00000533346 MEIS1O00470 390 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 B4GALT4O60513 344 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 GGPS1O95749 300 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 MYL3P08590 195 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 RAG1P15918 1043 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 KCNA2P16389 499 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 HOXC8P31273 242 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 CIITAP33076 1130 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 RBM25P49756 843 aaKnown RBP11.26□□□□□ -0.61
NUP98-220ENST00000533346 AK2P54819 239 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 CCT2P78371 535 aaKnown RBP11.26□□□□□ -0.61
NUP98-220ENST00000533346 RBL2Q08999 1139 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 SCRN1Q12765 414 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 UBE2SQ16763 222 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 TRIM22Q8IYM9 498 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 DAGLBQ8NCG7 672 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 SLC17A8Q8NDX2 589 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 BICD2Q8TD16 824 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 BADQ92934 168 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 PHKBQ93100 1093 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 MXRA8Q9BRK3 442 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 C16orf70Q9BSU1 422 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 ANO3Q9BYT9 981 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
NUP98-220ENST00000533346 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 NFASCO94856 1347 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 UNC80Q8N2C7 3258 aa11.26□□□□□ -0.61
NUP98-220ENST00000533346 M0R2N6 131 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 ATP9AO75110 1047 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 CDKL5O76039 1030 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 PSMC6P62333 389 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
NUP98-220ENST00000533346 CEP55Q53EZ4 464 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 SPATA33Q96N06 139 aa11.25□□□□□ -0.61
NUP98-220ENST00000533346 KIF2CQ99661 725 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms