RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 BMP8BP34820 402 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 ZNF76P36508 570 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 CDK7P50613 346 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 PURAQ00577 322 aaKnown RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 ARHGAP1Q07960 439 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 NTRK3Q16288 839 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 WASF1Q92558 559 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 GPRASP2Q96D09 838 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 UBE2OQ9C0C9 1292 aaKnown RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 ZMYND12Q9H0C1 365 aa17.03■□□□□ 0.32
PUF60-221ENST00000533162 COLQQ9Y215 455 aaPredicted RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 BAZ2BQ9UIF8 2168 aaKnown RBP17.03■□□□□ 0.32
PUF60-221ENST00000533162 LCTP09848 1927 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 PFKFB2O60825 505 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 PPFIA4O75335 1185 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 RGS20O76081 388 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 RAG1P15918 1043 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
PUF60-221ENST00000533162 AK2P54819 239 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 NLRP5P59047 1200 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 PTPN11Q06124 597 aaPredicted RBP17.02■□□□□ 0.32
PUF60-221ENST00000533162 MTMR1Q13613 665 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 MYSM1Q5VVJ2 828 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 NFRKBQ6P4R8 1299 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 REXO1Q8N1G1 1221 aaKnown RBP17.02■□□□□ 0.32
PUF60-221ENST00000533162 SLC43A3Q8NBI5 491 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 PDLIM7Q9NR12 457 aa17.02■□□□□ 0.32
PUF60-221ENST00000533162 LRRC37A2A6NM11 1700 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
PUF60-221ENST00000533162 PTGS1P23219 599 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 FAAP100Q0VG06 881 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 PKN1Q16512 942 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 METTL7BQ6UX53 244 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 GDF15Q99988 308 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 ANO3Q9BYT9 981 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
PUF60-221ENST00000533162 KIAA0355O15063 1070 aa17■□□□□ 0.31
PUF60-221ENST00000533162 CLK2P49760 499 aaKnown RBP17■□□□□ 0.31
PUF60-221ENST00000533162 CHMP4BP1P59074 171 aa17■□□□□ 0.31
PUF60-221ENST00000533162 PSMC6P62333 389 aa17■□□□□ 0.31
PUF60-221ENST00000533162 MDM2Q00987 491 aaPredicted RBP17■□□□□ 0.31
PUF60-221ENST00000533162 SCRN1Q12765 414 aa17■□□□□ 0.31
PUF60-221ENST00000533162 FAM47CQ5HY64 1035 aa17■□□□□ 0.31
PUF60-221ENST00000533162 HABP4Q5JVS0 413 aaKnown RBP17■□□□□ 0.31
PUF60-221ENST00000533162 TYW1BQ6NUM6 668 aa17■□□□□ 0.31
PUF60-221ENST00000533162 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
PUF60-221ENST00000533162 ZFP91Q96JP5 570 aaPredicted RBP17■□□□□ 0.31
PUF60-221ENST00000533162 JADE2Q9NQC1 790 aa17■□□□□ 0.31
PUF60-221ENST00000533162 NOD1Q9Y239 953 aa17■□□□□ 0.31
PUF60-221ENST00000533162 TIMP1P01033 207 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 SREBF1P36956 1147 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 SP2Q02086 613 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 JAKMIP3Q5VZ66 844 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 CYFIP1Q7L576 1253 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 C7orf31Q8N865 590 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 UBIAD1Q9Y5Z9 338 aa16.99■□□□□ 0.31
PUF60-221ENST00000533162 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 ITGB5P18084 799 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 ARHGAP4P98171 946 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 CEP55Q53EZ4 464 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 TMEM199Q8N511 208 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 BADQ92934 168 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 TRIM43Q96BQ3 446 aaPredicted RBP16.98■□□□□ 0.31
PUF60-221ENST00000533162 SDF4Q9BRK5 362 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 ZNF215Q9UL58 517 aaPredicted RBP16.98■□□□□ 0.31
PUF60-221ENST00000533162 LIMCH1Q9UPQ0 1083 aa16.98■□□□□ 0.31
PUF60-221ENST00000533162 STK36Q9NRP7 1315 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 SORBS3O60504 671 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 CD4P01730 458 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 RBM25P49756 843 aaKnown RBP16.97■□□□□ 0.31
PUF60-221ENST00000533162 FPGSQ05932 587 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 HSDL1Q3SXM5 330 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 NIPA1Q7RTP0 329 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 SH3RF1Q7Z6J0 888 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 TDHQ8IZJ6 230 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 CCDC155Q8N6L0 562 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 TNPO1Q92973 898 aaKnown RBP16.97■□□□□ 0.31
PUF60-221ENST00000533162 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
PUF60-221ENST00000533162 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 PCDHA4Q9UN74 947 aa16.97■□□□□ 0.31
PUF60-221ENST00000533162 ST18O60284 1047 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 B4GALT4O60513 344 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 CYP3A4P08684 503 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
PUF60-221ENST00000533162 PSEN2P49810 448 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 SETQ01105 290 aaPredicted RBP16.96■□□□□ 0.31
PUF60-221ENST00000533162 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■□□□ 12.2
PUF60-221ENST00000533162 MFSD10Q14728 455 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 SESTD1Q86VW0 696 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms