RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 KIF22Q14807 665 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 IL17AQ16552 155 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 DTHD1Q6ZMT9 781 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 NLRX1Q86UT6 975 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 MRVI1Q9Y6F6 885 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 CASP8AP2Q9UKL3 1982 aa15.95■□□□□ 0.14
HIF3A-215ENST00000533145 MSH4O15457 936 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 RGS20O76081 388 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 IGHA2P01877 340 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 ARP10275 920 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 LONP1P36776 959 aaKnown RBP15.94■□□□□ 0.14
HIF3A-215ENST00000533145 FXR2P51116 673 aaKnown RBP eCLIP15.94■□□□□ 0.14
HIF3A-215ENST00000533145 PDE4DQ08499 809 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 IRF5Q13568 498 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 NPLOC4Q8TAT6 608 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 SLC5A5Q92911 643 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 MAML3Q96JK9 1138 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 CDHR1Q96JP9 859 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 TRIM47Q96LD4 638 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 WDR11Q9BZH6 1224 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 KCNH7Q9NS40 1196 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 ZSWIM8A7E2V4 1837 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 SYNGAP1Q96PV0 1343 aa15.94■□□□□ 0.14
HIF3A-215ENST00000533145 FAM237AA0A1B0GTK4 181 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 SPATA31C2B4DYI2 1134 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 GADD45BO75293 160 aaPredicted RBP15.93■□□□□ 0.14
HIF3A-215ENST00000533145 GNRH1P01148 92 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 TGFB3P10600 412 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 XRCC5P13010 732 aaKnown RBP15.93■□□□□ 0.14
HIF3A-215ENST00000533145 CMA1P23946 247 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 RGS2P41220 211 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 MTMR1Q13613 665 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 GNPTABQ3T906 1256 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 IGSF22Q8N9C0 903 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 AK8Q96MA6 479 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 RIT2Q99578 217 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 WBP1LQ9NX94 342 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
HIF3A-215ENST00000533145 VWA3AA6NCI4 1184 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 GOLGA6L4A6NEF3 574 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 PSMD10O75832 226 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 TXKP42681 527 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 GRIN1Q05586 938 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 SEMA3FQ13275 785 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 RESP18Q5W5W9 173 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 OLFML2BQ68BL8 750 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 KCNV1Q6PIU1 500 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 ARMCX2Q7L311 632 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 ZFP91Q96JP5 570 aaPredicted RBP15.92■□□□□ 0.14
HIF3A-215ENST00000533145 CLIC6Q96NY7 704 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 SENP7Q9BQF6 1050 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 TINF2Q9BSI4 451 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 ZNF577Q9BSK1 485 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 ARHGAP39Q9C0H5 1083 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
HIF3A-215ENST00000533145 TTC12Q9H892 705 aaPredicted RBP15.92■□□□□ 0.14
HIF3A-215ENST00000533145 AGO4Q9HCK5 861 aaKnown RBP15.92■□□□□ 0.14
HIF3A-215ENST00000533145 RBM47A0AV96 593 aaKnown RBP15.91■□□□□ 0.14
HIF3A-215ENST00000533145 IPO5O00410 1097 aaKnown RBP15.91■□□□□ 0.14
HIF3A-215ENST00000533145 DHX15O43143 795 aaKnown RBP15.91■□□□□ 0.14
HIF3A-215ENST00000533145 MARCH6O60337 910 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 FKTNO75072 461 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 SNAI1O95863 264 aaPredicted RBP15.91■□□□□ 0.14
HIF3A-215ENST00000533145 HOXD10P28358 340 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 TMEM266Q2M3C6 531 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 SHC4Q6S5L8 630 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 B3GNT9Q6UX72 402 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 ERO1AQ96HE7 468 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 APBA2Q99767 749 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 BEGAINQ9BUH8 593 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 RAB34Q9BZG1 259 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 CCSER1Q9C0I3 900 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 VTA1Q9NP79 307 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 TBC1D22BQ9NU19 505 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 NFASCO94856 1347 aa15.91■□□□□ 0.14
HIF3A-215ENST00000533145 FOXN1O15353 648 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 SLC26A4O43511 780 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 TECP42680 631 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 CAP1Q01518 475 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 SPIRE1Q08AE8 756 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 PPP2R5CQ13362 524 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 SKOR2Q2VWA4 1001 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-215ENST00000533145 OTOP1Q7RTM1 612 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 TRMT44Q8IYL2 757 aaKnown RBP15.9■□□□□ 0.14
HIF3A-215ENST00000533145 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
HIF3A-215ENST00000533145 KATNBL1Q9H079 304 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 ABHD16BQ9H3Z7 469 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
HIF3A-215ENST00000533145 VAV3Q9UKW4 847 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 HPSEQ9Y251 543 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 STK24Q9Y6E0 443 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 WDR81Q562E7 1941 aa15.9■□□□□ 0.14
HIF3A-215ENST00000533145 ATP9AO75110 1047 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 MBD3O95983 291 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 KCNA2P16389 499 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 CYP2B6P20813 491 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
HIF3A-215ENST00000533145 LRCH2Q5VUJ6 765 aa15.89■□□□□ 0.13
HIF3A-215ENST00000533145 TAPT1Q6NXT6 567 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms