RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PPTC7Q8NI37 304 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 MYLIPQ8WY64 445 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 HERVK_113Q902F9 699 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 KCNB2Q92953 911 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 INPP4AQ96PE3 977 aaPredicted RBP20.55■□□□□ 0.88
SMG1-203ENST00000532700 ALG1Q9BT22 464 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 SEZ6LQ9BYH1 1024 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 PBX4Q9BYU1 374 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 HDAC6Q9UBN7 1215 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 ADAMTS3O15072 1205 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 F2P00734 622 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 CDC27P30260 824 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 PSEN2P49810 448 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 WWC2Q6AWC2 1192 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 PSRC1Q6PGN9 363 aaPredicted RBP20.54■□□□□ 0.88
SMG1-203ENST00000532700 DHX32Q7L7V1 743 aaKnown RBP20.54■□□□□ 0.88
SMG1-203ENST00000532700 DEFB128Q7Z7B8 93 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 LZTS2Q9BRK4 669 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 SNX14Q9Y5W7 946 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 CHD9Q3L8U1 2897 aa20.54■□□□□ 0.88
SMG1-203ENST00000532700 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.53■□□□□ 0.88
SMG1-203ENST00000532700 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.53■□□□□ 0.88
SMG1-203ENST00000532700 PIK3CDO00329 1044 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 LAMC2Q13753 1193 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 MFSD10Q14728 455 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 PTGISQ16647 500 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 DGKDQ16760 1214 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 TCTN1Q2MV58 587 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 RNF20Q5VTR2 975 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 SPATA33Q96N06 139 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 C16orf70Q9BSU1 422 aa20.53■□□□□ 0.88
SMG1-203ENST00000532700 SEC63Q9UGP8 760 aaKnown RBP20.53■□□□□ 0.88
SMG1-203ENST00000532700 YBX2Q9Y2T7 364 aaKnown RBP20.53■□□□□ 0.88
SMG1-203ENST00000532700 KLF18A0A0U1RQI7 1052 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 SPATA31C2B4DYI2 1134 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 FGBP02675 491 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 CALM1P0DP23 149 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 CALM2P0DP24 149 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 CALM3P0DP25 149 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
SMG1-203ENST00000532700 HSPA4P34932 840 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 GNAQP50148 359 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 PTPN11Q06124 597 aaPredicted RBP20.52■□□□□ 0.88
SMG1-203ENST00000532700 GRIN2CQ14957 1233 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 KIAA0753Q2KHM9 967 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 SESTD1Q86VW0 696 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 SMARCC2Q8TAQ2 1214 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 GTF2IRD1Q9UHL9 959 aa20.52■□□□□ 0.88
SMG1-203ENST00000532700 IQCF3P0C7M6 154 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 SUPT20HL2P0C7V6 817 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 MYOGP15173 224 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 ICAM3P32942 547 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 RABGGTBP53611 331 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 TRAF1Q13077 416 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 PCNX4Q63HM2 1172 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 HEATR3Q7Z4Q2 680 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 TRIM50Q86XT4 487 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 PGBD1Q96JS3 809 aa20.51■□□□□ 0.87
SMG1-203ENST00000532700 ATP9AO75110 1047 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 ITGB5P18084 799 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 TRIM71Q2Q1W2 868 aaKnown RBP20.5■□□□□ 0.87
SMG1-203ENST00000532700 TRAF7Q6Q0C0 670 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 CYFIP1Q7L576 1253 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
SMG1-203ENST00000532700 PSTPIP2Q9H939 334 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 SIP14410 1827 aa20.5■□□□□ 0.87
SMG1-203ENST00000532700 GOLGA8AA7E2F4 631 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 GOLGA8BA8MQT2 603 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 ZBTB43O43298 467 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 LGALS2P05162 132 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 RTN1Q16799 776 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 Q6ZUG5 572 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 OSBPL7Q9BZF2 842 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 NKX2-4Q9H2Z4 354 aa20.49■□□□□ 0.87
SMG1-203ENST00000532700 STXBP3O00186 592 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 PPFIA3O75145 1194 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 TGFB3P10600 412 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 ADD1P35611 737 aaKnown RBP20.48■□□□□ 0.87
SMG1-203ENST00000532700 SP4Q02446 784 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 MBTPS1Q14703 1052 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 SLC17A8Q8NDX2 589 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 CUL5Q93034 780 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 GPR20Q99678 358 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 ZNF576Q9H609 170 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 MLXIPQ9HAP2 919 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 TMEM260Q9NX78 707 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
SMG1-203ENST00000532700 V9GY48 417 aaPredicted RBP20.48■□□□□ 0.87
SMG1-203ENST00000532700 FIBPO43427 364 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 PPFIA4O75335 1185 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 ARHGEF15O94989 841 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 TMCO2Q7Z6W1 182 aaPredicted RBP20.47■□□□□ 0.87
SMG1-203ENST00000532700 C7orf31Q8N865 590 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 BRF1Q92994 677 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 PCDHA6Q9UN73 950 aa20.47■□□□□ 0.87
SMG1-203ENST00000532700 NOD1Q9Y239 953 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms