RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 TRIM50Q86XT4 487 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 U2AF1L4Q8WU68 220 aaKnown RBP9.52□□□□□ -0.88
CTNND1-232ENST00000532649 ZBTB9Q96C00 473 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 AIFM3Q96NN9 605 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 POLR3EQ9NVU0 708 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 UTYO14607 1347 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 STK25O00506 426 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 ARHGAP6O43182 974 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 CAMTA2O94983 1202 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 LARGE1O95461 756 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.88
CTNND1-232ENST00000532649 ELMSAN1Q6PJG2 1045 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 RNF207Q6ZRF8 634 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 PHLDB2Q86SQ0 1253 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 IQCDQ96DY2 449 aa9.52□□□□□ -0.88
CTNND1-232ENST00000532649 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PPP4R4Q6NUP7 873 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PALM2Q8IXS6 379 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PPM1KQ8N3J5 372 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
CTNND1-232ENST00000532649 ATXN8OSP0DMR3 200 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PPP2R3AQ06190 1150 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PPFIA1Q13136 1202 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PDE1CQ14123 709 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-232ENST00000532649 KRT81Q14533 505 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 ARHGEF2Q92974 986 aaKnown RBP9.52□□□□□ -0.89
CTNND1-232ENST00000532649 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 IFIH1Q9BYX4 1025 aaKnown RBP9.52□□□□□ -0.89
CTNND1-232ENST00000532649 KMT5AQ9NQR1 393 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 ABCC12Q96J65 1359 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 A0A1W2PQ27 194 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 A0A1W2PQ64 194 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 A0A1W2PQD8 194 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PIK3CAP42336 1068 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 NT5C2P49902 561 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 MTERF2Q49AM1 385 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 EEF2KMTQ96G04 330 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 PSMB7Q99436 277 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 TMEM47Q9BQJ4 181 aa9.52□□□□□ -0.89
CTNND1-232ENST00000532649 TECPR2O15040 1411 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 EBAG9O00559 213 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CEP104O60308 925 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 SYCE1Q8N0S2 351 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CCDC68Q9H2F9 335 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CD163L1Q9NR16 1453 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CAPN9O14815 690 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 NMT2O60551 498 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 ABCB4P21439 1286 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 C8orf74Q6P047 294 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 ABI1Q8IZP0 508 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CRAMP1Q96RY5 1269 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 FTOQ9C0B1 505 aaKnown RBP eCLIP9.51□□□□□ -0.892e-18■□□□□ 11.2
CTNND1-232ENST00000532649 LMCD1Q9NZU5 365 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 ZNF215Q9UL58 517 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CDC25AP30304 524 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PCK1P35558 622 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 IFRD2Q12894 506 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 ITPK1Q13572 414 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 TMTC4Q5T4D3 741 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PDZD4Q76G19 769 aaPredicted RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PEX26Q7Z412 305 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 SLC17A8Q8NDX2 589 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 FAM76AQ8TAV0 307 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 RIPOR2Q9Y4F9 1068 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 COBLO75128 1261 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PSAPP07602 524 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 GAP43P17677 238 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 FBXW4P57775 412 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 ZNF34Q8IZ26 560 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 KRT222Q8N1A0 295 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CEP95Q96GE4 821 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 RAVER2Q9HCJ3 691 aaKnown RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 FANCLQ9NW38 375 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 LRFN2Q9ULH4 789 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 IQSEC2Q5JU85 1478 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 HNRNPCL2B2RXH8 293 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 HNRNPCL1O60812 293 aaKnown RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PDE6CP51160 858 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 POLR2FP61218 127 aaKnown RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 DNAJC21Q5F1R6 531 aaKnown RBP9.51□□□□□ -0.89
CTNND1-232ENST00000532649 JADE1Q6IE81 842 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 TMTC3Q6ZXV5 915 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 CYB5R4Q7L1T6 521 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 C10orf67Q8IYJ2 551 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 PPP4R1Q8TF05 950 aa9.51□□□□□ -0.89
CTNND1-232ENST00000532649 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
CTNND1-232ENST00000532649 KRT10P13645 584 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 CLCN1P35523 988 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 SPATA1Q5VX52 437 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 NLRP7Q8WX94 980 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 HOXC10Q9NYD6 342 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 VPS18Q9P253 973 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PARP2Q9UGN5 583 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 ANAPC5Q9UJX4 755 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 FEM1BQ9UK73 627 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 PCDHA5Q9Y5H7 936 aa9.5□□□□□ -0.89
CTNND1-232ENST00000532649 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms