RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 STRBPQ96SI9 672 aaKnown RBP16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
PCDHA9-202ENST00000532602 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 SLC27A3Q5K4L6 730 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 CACTINQ8WUQ7 758 aaKnown RBP16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 MYL7Q01449 175 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 PTCH1Q13635 1447 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 R3HDM1Q15032 1099 aaKnown RBP16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 DENND2CQ68D51 928 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 RSRC2Q7L4I2 434 aaKnown RBP16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 ELMSAN1Q6PJG2 1045 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 SAR1BQ9Y6B6 198 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 MYL3P08590 195 aa16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 CNOT6LQ96LI5 555 aaKnown RBP16.12■□□□□ 0.17
PCDHA9-202ENST00000532602 GKAP1Q5VSY0 366 aaPredicted RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 SPATA1Q5VX52 437 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 BZW2Q9Y6E2 419 aaKnown RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 LRRC7Q96NW7 1537 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 NBPF26B4DH59 902 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 NDUFAB1O14561 156 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 FOXO4P98177 505 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 ITKQ08881 620 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 NBPF10Q6P3W6 841 aaKnown RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 NBPF15Q8N660 670 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 RAB3IPQ96QF0 476 aaPredicted RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 KRT12Q99456 494 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 KIF23Q02241 960 aaPredicted RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 KAZNQ674X7 775 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 VSIG1Q86XK7 387 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 TRIM11Q96F44 468 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 IPO11Q9UI26 975 aaKnown RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 A6NJR5 290 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 ARPP19P56211 112 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 EXOC3L4Q17RC7 722 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 C10orf67Q8IYJ2 551 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 LINC00116Q8NCU8 138 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 ACCSQ96QU6 501 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 HYOU1Q9Y4L1 999 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 PNMA6FA0A0J9YX94 578 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 SFI1A8K8P3 1242 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 U2AF2P26368 475 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 HOXA7P31268 230 aaPredicted RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 RNASELQ05823 741 aaKnown RBP16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 KIAA1841Q6NSI8 718 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 BBOF1Q8ND07 529 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 MCUR1Q96AQ8 359 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 RABEP2Q9H5N1 569 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 PCDHB4Q9Y5E5 795 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 MYO3BQ8WXR4 1341 aa16.11■□□□□ 0.17
PCDHA9-202ENST00000532602 SRGAP2CP0DJJ0 459 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 SEPT2Q15019 361 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 RPUSD2Q8IZ73 545 aaKnown RBP16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 EPSTI1Q96J88 318 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 ESYT2A0FGR8 921 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 PHLDB2Q86SQ0 1253 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 CEP57Q86XR8 500 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 TMEM206Q9H813 350 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 SCAF8Q9UPN6 1271 aaKnown RBP16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 XPAP23025 273 aaPredicted RBP16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 HINFPQ9BQA5 517 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 A0A1W2PQ27 194 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 A0A1W2PQ64 194 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 A0A1W2PQD8 194 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 PRPF3O43395 683 aaKnown RBP16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 CEP85LQ5SZL2 805 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 RNF207Q6ZRF8 634 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 HAUS4Q9H6D7 363 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 JCADQ9P266 1359 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 HGSO14964 777 aaPredicted RBP16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 ANKRD20A3Q5VUR7 823 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 NME8Q8N427 588 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 C2orf69Q8N8R5 385 aa16.1■□□□□ 0.17
PCDHA9-202ENST00000532602 ASNSP08243 561 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 ATP11AP98196 1134 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 SLC39A14Q15043 492 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 KRT71Q3SY84 523 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 MXD3Q9BW11 206 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 STK17AQ9UEE5 414 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 BCAP29Q9UHQ4 241 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 MYO3AQ8NEV4 1616 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 RPS6KA2Q15349 733 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 PIK3C2BO00750 1634 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 RPAP1Q9BWH6 1393 aaPredicted RBP16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 PPP6R2O75170 966 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 TCP1P17987 556 aaKnown RBP16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 WHAMMP3Q1A5X7 153 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 TMEM179Q6ZVK1 233 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 VCX3BQ9H321 246 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms