RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 MSH4O15457 936 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 ARP10275 920 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 MCM4P33991 863 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 ARMCX2Q7L311 632 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 MSL3Q8N5Y2 521 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 GPRASP2Q96D09 838 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 ERO1AQ96HE7 468 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 FAM20AQ96MK3 541 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 FBXO2Q9UK22 296 aaPredicted RBP20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 GABRQQ9UN88 632 aa20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 SRPRBQ9Y5M8 271 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-208ENST00000532446 CYP2B6P20813 491 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 ME1P48163 572 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 MTMR1Q13613 665 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 IL17AQ16552 155 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 NLRX1Q86UT6 975 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 KCNH7Q9NS40 1196 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 PCDHA7Q9UN72 937 aa20.33■□□□□ 0.85
PPP1CA-208ENST00000532446 SYNGAP1Q96PV0 1343 aa20.33■□□□□ 0.84
PPP1CA-208ENST00000532446 GOLGA6L22H0YM25 854 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 MAFGO15525 162 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 IGHA2P01877 340 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 XRCC5P13010 732 aaKnown RBP20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 FLT3LGP49771 235 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 SEMA3FQ13275 785 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 GNPTABQ3T906 1256 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 AXDND1Q5T1B0 1012 aaPredicted RBP20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 OLFML2BQ68BL8 750 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 SLFN12Q8IYM2 578 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 ABHD8Q96I13 439 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 TINF2Q9BSI4 451 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 FLRT1Q9NZU1 646 aa20.32■□□□□ 0.84
PPP1CA-208ENST00000532446 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 SNAI1O95863 264 aaPredicted RBP20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 GNRH1P01148 92 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 HOXD10P28358 340 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 ICAM3P32942 547 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 PRKCZQ05513 592 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 DTHD1Q6ZMT9 781 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 SLC5A5Q92911 643 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 CDHR1Q96JP9 859 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 AGO4Q9HCK5 861 aaKnown RBP20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 LMBRD1Q9NUN5 540 aa20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.31■□□□□ 0.84
PPP1CA-208ENST00000532446 SPATA31C2B4DYI2 1134 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 MARCH6O60337 910 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 CUTAO60888 179 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 TXKP42681 527 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 GRIN1Q05586 938 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 CCL14Q16627 93 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 ADALQ6DHV7 355 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 EEPD1Q7L9B9 569 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 GJA10Q969M2 543 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 CLIC6Q96NY7 704 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 UIMC1Q96RL1 719 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 ZNF577Q9BSK1 485 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 KATNBL1Q9H079 304 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 SRRDQ9UH36 339 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 DOCK5Q9H7D0 1870 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 VWA3AA6NCI4 1184 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 IPO5O00410 1097 aaKnown RBP20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 FXR2P51116 673 aaKnown RBP eCLIP20.3■□□□□ 0.846e-8■■□□□ 11.8
PPP1CA-208ENST00000532446 ARHGEF6Q15052 776 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 FBXO16Q8IX29 292 aaPredicted RBP20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 ZNF579Q8NAF0 562 aaKnown RBP20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 TTC12Q9H892 705 aaPredicted RBP20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 VTA1Q9NP79 307 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 PCDHA12Q9UN75 941 aa20.3■□□□□ 0.84
PPP1CA-208ENST00000532446 ATP9AO75110 1047 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 GADD45BO75293 160 aaPredicted RBP20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 PSMD10O75832 226 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 IRF5Q13568 498 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 RIT2Q99578 217 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 CSRNP2Q9H175 543 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 ABHD16BQ9H3Z7 469 aa20.29■□□□□ 0.84
PPP1CA-208ENST00000532446 DDX11L8A8MPP1 907 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 DHX15O43143 795 aaKnown RBP20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 TGFB3P10600 412 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 KCNA2P16389 499 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 LONP1P36776 959 aaKnown RBP20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 TECP42680 631 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 ITGB3BPQ13352 177 aaPredicted RBP20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 TMEM266Q2M3C6 531 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 LRCH2Q5VUJ6 765 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 IGSF22Q8N9C0 903 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 MCOLN1Q9GZU1 580 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 VAV3Q9UKW4 847 aa20.28■□□□□ 0.84
PPP1CA-208ENST00000532446 A0A1W2PQ27 194 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 A0A1W2PQ64 194 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 A0A1W2PQD8 194 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 RBM47A0AV96 593 aaKnown RBP20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 GAS7O60861 476 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 UBE2HP62256 183 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 SPIRE1Q08AE8 756 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 PDIA5Q14554 519 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 NFKBIBQ15653 356 aa20.27■□□□□ 0.84
PPP1CA-208ENST00000532446 TAPT1Q6NXT6 567 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms