RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 SH2D4AQ9H788 454 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 CYTH3O43739 400 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 GCNT3O95395 438 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 TRAPPC3LQ5T215 181 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 DAAM2Q86T65 1068 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 TNFRSF25Q93038 417 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 CDCA7Q9BWT1 371 aaPredicted RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 SEMA6BQ9H3T3 888 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 VIPAS39Q9H9C1 493 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.47□□□□□ -0.41
NXF1-211ENST00000531709 KRIT1O00522 736 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 AMPD2Q01433 879 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 NPY5RQ15761 445 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 CEP57Q86XR8 500 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 DYDC1Q8WWB3 177 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 STK17AQ9UEE5 414 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 IRAK1P51617 712 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
NXF1-211ENST00000531709 CCDC121Q6ZUS5 278 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 MAEAQ7L5Y9 396 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 EFCAB13Q8IY85 973 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 SELENOSQ9BQE4 189 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
NXF1-211ENST00000531709 CLIC2O15247 247 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 CARSP49589 748 aaKnown RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 MARCH10Q8NA82 808 aaPredicted RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 ZC3H12CQ9C0D7 883 aaKnown RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 EMILIN3Q9NT22 766 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 NPHP3-ACAD11A0A0J9YXS1 232 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 APBA1Q02410 837 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 IFT88Q13099 833 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 KRT71Q3SY84 523 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 SBK1Q52WX2 424 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 EMBQ6PCB8 327 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 USP17L6PQ6QN14 398 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 DNAAF5Q86Y56 855 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 ARFGAP2Q8N6H7 521 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 C7orf25Q9BPX7 421 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.41
NXF1-211ENST00000531709 RIC8AQ9NPQ8 531 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 DNM3Q9UQ16 869 aa12.46□□□□□ -0.41
NXF1-211ENST00000531709 A0A087WUV0 522 aaPredicted RBP12.46□□□□□ -0.42
NXF1-211ENST00000531709 EPHB6O15197 1021 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 GUCY1A3Q02108 690 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 TADA2BQ86TJ2 420 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 ZNF507Q8TCN5 953 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 LMBR1Q8WVP7 490 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 NT5C3AQ9H0P0 336 aa12.46□□□□□ -0.42
NXF1-211ENST00000531709 ZSCAN5CA6NGD5 496 aaPredicted RBP12.45□□□□□ -0.42
NXF1-211ENST00000531709 FLOT1O75955 427 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 FAM13AO94988 1023 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 SERPING1P05155 500 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 RASA1P20936 1047 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 PRPHP41219 470 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 SNAP25P60880 206 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 NFIXQ14938 502 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 ARHGAP44Q17R89 818 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 GBP6Q6ZN66 633 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 KIAA0895Q8NCT3 520 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 KLRC4O43908 158 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 SYF2O95926 243 aaKnown RBP12.45□□□□□ -0.42
NXF1-211ENST00000531709 EPB41P11171 864 aaKnown RBP12.45□□□□□ -0.42
NXF1-211ENST00000531709 COASYQ13057 564 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 LLGL1Q15334 1064 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 GUF1Q8N442 669 aaKnown RBP12.45□□□□□ -0.42
NXF1-211ENST00000531709 RAD54LQ92698 747 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 ARL8AQ96BM9 186 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 PKD2L1Q9P0L9 805 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 POTEB3A0JP26 581 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 SFI1A8K8P3 1242 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 POTECB2RU33 542 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 PLA2G4BP0C869 781 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 POTEBQ6S5H4 581 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 CABS1Q96KC9 395 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 ERGIC2Q96RQ1 377 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 ZMYND12Q9H0C1 365 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 BCL9O00512 1426 aa12.45□□□□□ -0.42
NXF1-211ENST00000531709 SLC37A4O43826 429 aa12.44□□□□□ -0.42
NXF1-211ENST00000531709 GLIS3Q8NEA6 775 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms