RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ALDH5A1P51649 535 aaPredicted RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 DLX2Q07687 328 aaPredicted RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 GPM6BQ13491 265 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 PPP2R5BQ15173 497 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 BRDTQ58F21 947 aaPredicted RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 GDF6Q6KF10 455 aaPredicted RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 CTR9Q6PD62 1173 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 NSMFQ6X4W1 530 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 FBXO11Q86XK2 927 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 DDRGK1Q96HY6 314 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 PURBQ96QR8 312 aaKnown RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 IRF2BPLQ9H1B7 796 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
CD44-232ENST00000531118 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
CD44-232ENST00000531118 CEP250Q9BV73 2442 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 A6NJR5 290 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 TMEM232C9JQI7 657 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 CKBP12277 381 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 BMP3P12645 472 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 ID4P47928 161 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 STAT2P52630 851 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 RARSP54136 660 aaKnown RBP9.8□□□□□ -0.84
CD44-232ENST00000531118 ZXDAP98168 799 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 ATP8B2P98198 1209 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 CTC1Q2NKJ3 1217 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 TRAF7Q6Q0C0 670 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.8□□□□□ -0.84
CD44-232ENST00000531118 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 SESTD1Q86VW0 696 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 RPAP2Q8IXW5 612 aaPredicted RBP9.8□□□□□ -0.84
CD44-232ENST00000531118 MYOCDQ8IZQ8 938 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 COPS5Q92905 334 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 FSD1Q9BTV5 496 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 CLIP2Q9UDT6 1046 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 SYNPO2Q9UMS6 1093 aa9.8□□□□□ -0.84
CD44-232ENST00000531118 EP300Q09472 2414 aaPredicted RBP9.8□□□□□ -0.84
CD44-232ENST00000531118 ACACBO00763 2458 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 NKRFO15226 690 aaKnown RBP eCLIP9.79□□□□□ -0.84
CD44-232ENST00000531118 NCK2O43639 380 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 KPNA6O60684 536 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 RGS20O76081 388 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 AMHP03971 560 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 CHMP4BP1P59074 171 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 SIGLEC14Q08ET2 396 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 HYAL1Q12794 435 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 IKBKEQ14164 716 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 MBTPS1Q14703 1052 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 SLFN13Q68D06 897 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 FAM160B2Q86V87 743 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 TRMT2AQ8IZ69 625 aaKnown RBP9.79□□□□□ -0.84
CD44-232ENST00000531118 ASIC4Q96FT7 647 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 CEP95Q96GE4 821 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 CD207Q9UJ71 328 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 SLC4A4Q9Y6R1 1079 aa9.79□□□□□ -0.84
CD44-232ENST00000531118 DNAH14Q0VDD8 3507 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 LOC102724159A0A0B4J2E5 919 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 H0Y858 1186 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 KDM4AO75164 1064 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 LGR5O75473 907 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 CHGBP05060 677 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 IKQ13123 557 aaPredicted RBP9.78□□□□□ -0.84
CD44-232ENST00000531118 PWP2Q15269 919 aaKnown RBP9.78□□□□□ -0.84
CD44-232ENST00000531118 TRIM71Q2Q1W2 868 aaKnown RBP9.78□□□□□ -0.84
CD44-232ENST00000531118 SLC30A10Q6XR72 485 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 METTL3Q86U44 580 aaKnown RBP9.78□□□□□ -0.84
CD44-232ENST00000531118 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 STK11IPQ8N1F8 1099 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 WNT8BQ93098 351 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 YME1L1Q96TA2 773 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 TLR9Q9NR96 1032 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 ADD3Q9UEY8 706 aaKnown RBP9.78□□□□□ -0.84
CD44-232ENST00000531118 GTF2IRD1Q9UHL9 959 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 CCPG1Q9ULG6 757 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 VPS13AQ96RL7 3174 aa9.78□□□□□ -0.84
CD44-232ENST00000531118 LOC730098B7Z3J9 87 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 LINC01565O15544 149 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 ANP32CO43423 234 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 ARIH2O95376 493 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 TTLL1O95922 423 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 MMP3P08254 477 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 AVPR2P30518 371 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 CTNNB1P35222 781 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 NBL1P41271 181 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 SNAP25P60880 206 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 CBX2Q14781 532 aaPredicted RBP9.77□□□□□ -0.85
CD44-232ENST00000531118 ZNF618Q5T7W0 954 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 RASGRP2Q7LDG7 609 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 ERC1Q8IUD2 1116 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 TMEM57Q8N5G2 664 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 SCFD2Q8WU76 684 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 STAG1Q8WVM7 1258 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 KAT2BQ92831 832 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 MKL1Q969V6 931 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 LMAN2LQ9H0V9 348 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 MKNK2Q9HBH9 465 aa9.77□□□□□ -0.85
CD44-232ENST00000531118 IL1RAPL2Q9NP60 686 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms