RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 PIBF1Q8WXW3 757 aa18.34■□□□□ 0.53
CHMP4A-204ENST00000530996 NECAB3Q96P71 396 aaPredicted RBP18.34■□□□□ 0.53
CHMP4A-204ENST00000530996 PIGSQ96S52 555 aa18.34■□□□□ 0.53
CHMP4A-204ENST00000530996 MLXIPQ9HAP2 919 aa18.34■□□□□ 0.53
CHMP4A-204ENST00000530996 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
CHMP4A-204ENST00000530996 LCHNA4D1U4 455 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 NBNO60934 754 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 RBL2Q08999 1139 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 GRM4Q14833 912 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 WTAPQ15007 396 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 CELF3Q5SZQ8 465 aaKnown RBP18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 SPRED2Q7Z698 418 aa18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 ZFP91Q96JP5 570 aaPredicted RBP18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 MAP3K20Q9NYL2 800 aaKnown RBP18.33■□□□□ 0.52
CHMP4A-204ENST00000530996 MUC3AQ02505 3323 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 NOP56O00567 594 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 GSPT1P15170 499 aaKnown RBP18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 COL9A1P20849 921 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 ZNF200P98182 395 aaPredicted RBP18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 GRB10Q13322 594 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 IKBKEQ14164 716 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 GNPTABQ3T906 1256 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
CHMP4A-204ENST00000530996 ABHD14A-ACY1A0A1B0GW23 586 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 C17orf102A2RUQ5 167 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 PALM3A6NDB9 673 aaPredicted RBP18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 EFCAB14O75071 495 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 RGS20O76081 388 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 CXCL10P02778 98 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 CYP21A2P08686 494 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 THPOP40225 353 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 GHRHRQ02643 423 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 MYSM1Q5VVJ2 828 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 WNT8BQ93098 351 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 MTMR8Q96EF0 704 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 COG5Q9UP83 839 aa18.31■□□□□ 0.52
CHMP4A-204ENST00000530996 EMSYQ7Z589 1322 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 MYO9BQ13459 2157 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 HAS3O00219 553 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 GPNMBQ14956 572 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 TCTN1Q2MV58 587 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 CATIPQ7Z7H3 387 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 VSIG10LQ86VR7 867 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 MYOCDQ8IZQ8 938 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 SAMD3Q8N6K7 520 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 NCOA7Q8NI08 942 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 GPKOWQ92917 476 aaPredicted RBP eCLIP18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 HLA-CQ95604 372 aa18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 COL4A4P53420 1690 aaPredicted RBP18.3■□□□□ 0.52
CHMP4A-204ENST00000530996 PNMA6FA0A0J9YX94 578 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 PPFIA4O75335 1185 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 LGR5O75473 907 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 GJB5O95377 273 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 HOXD8P13378 290 aaPredicted RBP18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 POU3F3P20264 500 aaPredicted RBP18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 PDE4AP27815 886 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 PTH1RQ03431 593 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 TRIM71Q2Q1W2 868 aaKnown RBP18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 ATP6V0A1Q93050 837 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 TGS1Q96RS0 853 aaKnown RBP18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 RAD9AQ99638 391 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 SENP2Q9HC62 589 aa18.29■□□□□ 0.52
CHMP4A-204ENST00000530996 RSPH10B2B2RC85 870 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 RBAK-RBAKDNI3L0D1 243 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 AMHP03971 560 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 LGALS2P05162 132 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 CTSHP09668 335 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 RSPH10BP0C881 870 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SMIM10L2AP0DMW4 78 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SMIM10L2BP0DMW5 78 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 TGFB3P10600 412 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 BMP1P13497 986 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SP2Q02086 613 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SP4Q02446 784 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 CUL5Q93034 780 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 RIOX1Q9H6W3 641 aa18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 SEC63Q9UGP8 760 aaKnown RBP18.28■□□□□ 0.52
CHMP4A-204ENST00000530996 MYH6P13533 1939 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 KIAA1217Q5T5P2 1943 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 XIRP2A4UGR9 3374 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 LINC01553A4QN01 128 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 E7EWF7 191 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 H3BRB1 525 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 CHMLP26374 656 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 MBTPS1Q14703 1052 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 TRAF7Q6Q0C0 670 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 SERINC5Q86VE9 423 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 CTCFLQ8NI51 663 aaPredicted RBP18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 C16orf70Q9BSU1 422 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 TUT1Q9H6E5 874 aaKnown RBP18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 ZNF215Q9UL58 517 aaPredicted RBP18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 TAF6LQ9Y6J9 622 aa18.27■□□□□ 0.52
CHMP4A-204ENST00000530996 CYTH3O43739 400 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 HIC1Q14526 733 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms