RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 KRT16P08779 473 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 DESP17661 470 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 EIF3BP55884 814 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 TFCP2Q12800 502 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 RNF10Q8N5U6 811 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 ARHGEF1Q92888 912 aaKnown RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
CSDE1-214ENST00000530886 NDNQ99608 321 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 VCX3BQ9H321 246 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 RNPEPL1Q9HAU8 725 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 VCX3AQ9NNX9 186 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 CAPN6Q9Y6Q1 641 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 PAPPAQ13219 1627 aa8.92□□□□□ -0.98
CSDE1-214ENST00000530886 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-214ENST00000530886 GOLGA8BA8MQT2 603 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
CSDE1-214ENST00000530886 HIP1RO75146 1068 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 ATP6V1G1O75348 118 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 YY1P25490 414 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 EEF1GP26641 437 aaKnown RBP8.91□□□□□ -0.98
CSDE1-214ENST00000530886 FAM69CQ0P6D2 419 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 NFRKBQ6P4R8 1299 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 TMEM154Q6P9G4 183 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 ATG9AQ7Z3C6 839 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 SMYD1Q8NB12 490 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 FBF1Q8TES7 1133 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 TLR10Q9BXR5 811 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 SAMD15Q9P1V8 674 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 MYH4Q9Y623 1939 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 KLF18A0A0U1RQI7 1052 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 RBM47A0AV96 593 aaKnown RBP8.91□□□□□ -0.98
CSDE1-214ENST00000530886 NEURL1BA8MQ27 555 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 H7C1D1 291 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 CPLX1O14810 134 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 PDE6BP35913 854 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 MMP13P45452 471 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 PEX5P50542 639 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 SCNN1BP51168 640 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 UBXN1Q04323 297 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 FOXB2Q5VYV0 432 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 USP49Q70CQ1 688 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 ASAP3Q8TDY4 903 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 ATP8B4Q8TF62 1192 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 PAGE5Q96GU1 130 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 HAPLN3Q96S86 360 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 NSRP1Q9H0G5 558 aaKnown RBP8.91□□□□□ -0.98
CSDE1-214ENST00000530886 CTTNBP2NLQ9P2B4 639 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 DENND2AQ9ULE3 1009 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 EID1Q9Y6B2 187 aa8.91□□□□□ -0.98
CSDE1-214ENST00000530886 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 CCDC15Q0P6D6 951 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 RILPL1Q5EBL4 403 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 DDX46Q7L014 1031 aaKnown RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 PRCCQ92733 491 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 SLC35B4Q969S0 331 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 RAB3IPQ96QF0 476 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 RPS6KC1Q96S38 1066 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 VPS16Q9H269 839 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 STRN4Q9NRL3 753 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 GALNT8Q9NY28 637 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 DUSP10Q9Y6W6 482 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 PALM3A6NDB9 673 aaPredicted RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 ZNF263O14978 683 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 SART1O43290 800 aaKnown RBP8.9□□□□□ -0.98
CSDE1-214ENST00000530886 UBOX5O94941 541 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 SRGNP10124 158 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 IDO1P14902 403 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 GUCY2FP51841 1108 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 STX17P56962 302 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 DIXDC1Q155Q3 683 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 TSNAXIP1Q2TAA8 658 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 NOSTRINQ8IVI9 506 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 STKLD1Q8NE28 680 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 STK32AQ8WU08 396 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 IRGQQ8WZA9 623 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 OSBP2Q969R2 916 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 HINFPQ9BQA5 517 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 RMI1Q9H9A7 625 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 TAB2Q9NYJ8 693 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 CTNND2Q9UQB3 1225 aa8.9□□□□□ -0.98
CSDE1-214ENST00000530886 MACROD2A1Z1Q3 448 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 GJB6O95452 261 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 CTNNA1P35221 906 aaKnown RBP8.9□□□□□ -0.99
CSDE1-214ENST00000530886 DNM2P50570 870 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 MAGOHP61326 146 aaKnown RBP8.9□□□□□ -0.99
CSDE1-214ENST00000530886 TEFQ10587 303 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 PAK1Q13153 545 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 GCKRQ14397 625 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 Q4G0T1 1027 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 RINLQ6ZS11 566 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 LRRC43Q8N309 656 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 IFT81Q8WYA0 676 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 SEC14L1Q92503 715 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 MAGOHBQ96A72 148 aaKnown RBP8.9□□□□□ -0.99
CSDE1-214ENST00000530886 KLHL29Q96CT2 875 aa8.9□□□□□ -0.99
CSDE1-214ENST00000530886 MTRQ99707 1265 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms