RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 TSEN34Q9BSV6 310 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 UBA5Q9GZZ9 404 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ZSCAN16Q9H4T2 348 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 PSTPIP2Q9H939 334 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 NCOA5Q9HCD5 579 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 PRDM5Q9NQX1 630 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 GPHNQ9NQX3 736 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 BARHL2Q9NY43 387 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 ADD3Q9UEY8 706 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 CIZ1Q9ULV3 898 aaPredicted RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 NOL7Q9UMY1 257 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 BAZ2BQ9UIF8 2168 aaKnown RBP5.47□□□□□ -1.53
SSBP3-213ENST00000530618 DMDP11532 3685 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 UMODL1Q5DID0 1318 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 WDFY4Q6ZS81 3184 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 MICAL3Q7RTP6 2002 aa5.47□□□□□ -1.53
SSBP3-213ENST00000530618 SIP14410 1827 aa5.46□□□□□ -1.53
SSBP3-213ENST00000530618 TMEM265A0A087WTH1 108 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 LOC102724159A0A0B4J2E5 919 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 CCDC194A0A1B0GVG4 234 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 VPS37CA5D8V6 355 aaPredicted RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 MOXD2PA6NHM9 499 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PQBP1O60828 265 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PLEKHA8P1O95397 391 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 BMP15O95972 392 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 CD44P16070 742 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 CDC27P30260 824 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PBX2P40425 430 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 ACVR2BQ13705 512 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 ADGRE1Q14246 886 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 GRIN2CQ14957 1233 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PWP2Q15269 919 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 KCNA10Q16322 511 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 CCDC144BQ3MJ40 725 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 TMEM240Q5SV17 173 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF697Q5TEC3 545 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 MCTP1Q6DN14 999 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 TTBK2Q6IQ55 1244 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 ARMCX2Q7L311 632 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 KRT25Q7Z3Z0 450 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 BRAPQ7Z569 592 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 RNF180Q86T96 592 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 FAM126BQ8IXS8 530 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 MAFAQ8NHW3 353 aaPredicted RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 MORC4Q8TE76 937 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PHKBQ93100 1093 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 TRERF1Q96PN7 1200 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PURBQ96QR8 312 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 PIGSQ96S52 555 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 LARP6Q9BRS8 491 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 JMJD4Q9H9V9 463 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 RAVER2Q9HCJ3 691 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 A1CFQ9NQ94 594 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 TSHZ2Q9NRE2 1034 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 RNF146Q9NTX7 359 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 CEP131Q9UPN4 1083 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 GNEQ9Y223 722 aaKnown RBP5.46□□□□□ -1.54
SSBP3-213ENST00000530618 ELP1O95163 1332 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 MYO7AQ13402 2215 aa5.46□□□□□ -1.54
SSBP3-213ENST00000530618 SMCO2A6NFE2 343 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ASB14A6NK59 587 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 GRXCR1A8MXD5 290 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 GOLGA6L22H0YM25 854 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ARVCFO00192 962 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 STX6O43752 255 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 MARCH6O60337 910 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 STAM2O75886 525 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 CFBP00751 764 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 TIMP1P01033 207 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ASGR1P07306 291 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 DNAJB2P25686 324 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF76P36508 570 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 FPGSQ05932 587 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 GNPTABQ3T906 1256 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 MUM1L1Q5H9M0 696 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ATL3Q6DD88 541 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 MFSD5Q6N075 450 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 TAPT1Q6NXT6 567 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 XRRA1Q6P2D8 792 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 NSMFQ6X4W1 530 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 RNF207Q6ZRF8 634 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 BLIDQ8IZY5 108 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 DNERQ8NFT8 737 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 CDHR1Q96JP9 859 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 AGBL1Q96MI9 1066 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ZNF396Q96N95 335 aaPredicted RBP5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ZMYND12Q9H0C1 365 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 WNT8AQ9H1J5 351 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 FOXP1Q9H334 677 aaPredicted RBP5.45□□□□□ -1.54
SSBP3-213ENST00000530618 ABHD16BQ9H3Z7 469 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 SENP2Q9HC62 589 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 RIC8AQ9NPQ8 531 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 PRDM6Q9NQX0 595 aa5.45□□□□□ -1.54
SSBP3-213ENST00000530618 STARD7Q9NQZ5 370 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms