RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 CSRNP2Q9H175 543 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 PRDM10Q9NQV6 1147 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 KCNH7Q9NS40 1196 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 FLRT1Q9NZU1 646 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 UBIAD1Q9Y5Z9 338 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 ELP1O95163 1332 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 TECP42680 631 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 SP4Q02446 784 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 KIF22Q14807 665 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
SOX6-213ENST00000530378 STXBP2Q15833 593 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 CSPP1Q1MSJ5 1256 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
SOX6-213ENST00000530378 USP49Q70CQ1 688 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ZNF296Q8WUU4 475 aaPredicted RBP12.04□□□□□ -0.48
SOX6-213ENST00000530378 MBOAT7Q96N66 472 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ZNF577Q9BSK1 485 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 GOLPH3LQ9H4A5 285 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 BCAS3Q9H6U6 928 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 KCNMB3Q9NPA1 279 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 BRCA2P51587 3418 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 A0A1B0GVL5 298 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 MEIS1O00470 390 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 PPP6R2O75170 966 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 BMP15O95972 392 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 EDNRBP24530 442 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 SEMA3FQ13275 785 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 TMEM63BQ5T3F8 832 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 DTHD1Q6ZMT9 781 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 FSIP1Q8NA03 581 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 IWS1Q96ST2 819 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
SOX6-213ENST00000530378 TTC12Q9H892 705 aaPredicted RBP12.04□□□□□ -0.48
SOX6-213ENST00000530378 JADE2Q9NQC1 790 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 PDGFCQ9NRA1 345 aa12.04□□□□□ -0.48
SOX6-213ENST00000530378 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 ATP9AO75110 1047 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 CYP2C19P33261 490 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 RGS2P41220 211 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 FLT3LGP49771 235 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 SETQ01105 290 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 MAP2K1Q02750 393 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 ITGB3BPQ13352 177 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 PRAMEF19Q5SWL8 479 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 SHC4Q6S5L8 630 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 APBA2Q99767 749 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 CFHR5Q9BXR6 569 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 PANK2Q9BZ23 570 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 AGO4Q9HCK5 861 aaKnown RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 TELO2Q9Y4R8 837 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 SRPRBQ9Y5M8 271 aaKnown RBP12.03□□□□□ -0.48
SOX6-213ENST00000530378 WDR81Q562E7 1941 aa12.03□□□□□ -0.48
SOX6-213ENST00000530378 ASB14A6NK59 587 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 IPO5O00410 1097 aaKnown RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 GAS7O60861 476 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 FKTNO75072 461 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 EIF3JO75822 258 aaKnown RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 LIG1P18858 919 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 ORC2Q13416 577 aaPredicted RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 GNPTABQ3T906 1256 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 NCAPH2Q6IBW4 605 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 NLRX1Q86UT6 975 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 PDILTQ8N807 584 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 SOCS4Q8WXH5 440 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 USP6NLQ92738 828 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 SLC5A5Q92911 643 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 FERMT2Q96AC1 680 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 PLIN2Q99541 437 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.48
SOX6-213ENST00000530378 TINF2Q9BSI4 451 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.48
SOX6-213ENST00000530378 LAD1O00515 517 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 CUTAO60888 179 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 ARIH2O95376 493 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 ELNP15502 786 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 UBE2HP62256 183 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 SP2Q02086 613 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 TMEM266Q2M3C6 531 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 GJC2Q5T442 439 aaPredicted RBP12.02□□□□□ -0.49
SOX6-213ENST00000530378 ARL6IP4Q66PJ3 421 aaKnown RBP12.02□□□□□ -0.49
SOX6-213ENST00000530378 XRRA1Q6P2D8 792 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 MAF1Q9H063 256 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 SLC5A4Q9NY91 659 aa12.02□□□□□ -0.49
SOX6-213ENST00000530378 SNAI1O95863 264 aaPredicted RBP12.01□□□□□ -0.49
SOX6-213ENST00000530378 PFKFB1P16118 471 aa12.01□□□□□ -0.49
SOX6-213ENST00000530378 UBA1P22314 1058 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms