RNA–Protein interactions for RNA: ENST00000530311.6

TRIM49D1-202, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 2,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-202ENST00000530311 EHHADHQ08426 723 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 ENOX2Q16206 610 aaKnown RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 ASTE1Q2TB18 679 aaPredicted RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 TMEM119Q4V9L6 283 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 HGSNATQ68CP4 663 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 PDXDC1Q6P996 788 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 SND1Q7KZF4 910 aaKnown RBP eCLIP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 NELFCDQ8IXH7 590 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 ADGRF4Q8IZF3 695 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 MMGT1Q8N4V1 131 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 AFAP1L1Q8TED9 768 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 AENQ8WTP8 325 aaKnown RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 MXD3Q9BW11 206 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 DDX4Q9NQI0 724 aaKnown RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 STK17AQ9UEE5 414 aa10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 RRP15Q9Y3B9 282 aaKnown RBP10.23□□□□□ -0.77
TRIM49D1-202ENST00000530311 E9PMD0 336 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 TRAF5O00463 557 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 ARID5AQ03989 594 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 COASYQ13057 564 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 PDIA5Q14554 519 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 KCTD1Q719H9 257 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 CACNA2D4Q7Z3S7 1137 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 SRLQ86TD4 932 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 CCDC84Q86UT8 332 aaPredicted RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 FNBP4Q8N3X1 1017 aaPredicted RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 RPGRQ92834 1020 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 TLR10Q9BXR5 811 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 DDX25Q9UHL0 483 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 RSPH14Q9UHP6 348 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 GGA1Q9UJY5 639 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 DAGLAQ9Y4D2 1042 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 NAP1L1P55209 391 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 GTF2IP78347 998 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 LRRC63Q05C16 580 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 TDRD12Q587J7 1177 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 KLHDC7AQ5VTJ3 777 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 MYOCDQ8IZQ8 938 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 TSEN2Q8NCE0 465 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 EHD4Q9H223 541 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 RBM12Q9NTZ6 932 aaKnown RBP10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 PANK4Q9NVE7 773 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 CDK5RAP2Q96SN8 1893 aa10.22□□□□□ -0.77
TRIM49D1-202ENST00000530311 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 C6orf229H3BNL8 230 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 MARCH6O60337 910 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 RPS6KA5O75582 802 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 STAT3P40763 770 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 RNASE9P60153 205 aaKnown RBP10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 POLR2FP61218 127 aaKnown RBP10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 KCTD19Q17RG1 926 aaPredicted RBP10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 CCDC40Q4G0X9 1142 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 ZCWPW2Q504Y3 356 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 HAUS3Q68CZ6 603 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 DNAAF5Q86Y56 855 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 TBC1D16Q8TBP0 767 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 FAM163AQ96GL9 167 aaPredicted RBP10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 LSM14BQ9BX40 385 aaKnown RBP10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 RABEP2Q9H5N1 569 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 RIC8AQ9NPQ8 531 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 FAM184BQ9ULE4 1060 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 HYOU1Q9Y4L1 999 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 COL4A3BPQ9Y5P4 624 aa10.21□□□□□ -0.77
TRIM49D1-202ENST00000530311 PNMA6FA0A0J9YX94 578 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L15C9J2P7 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L13C9JLJ4 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L11C9JVI0 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L18D6R9N7 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L22D6RA61 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L17D6RBQ6 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L19D6RCP7 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L20D6RJB6 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 PJA2O43164 708 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 FGFR1OPO95684 399 aaKnown RBP10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 FTCDO95954 541 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 IVLP07476 585 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 SNHG28P0DPA3 235 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 PLCG2P16885 1265 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 ATP2B4P23634 1241 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 GABPAQ06546 454 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L24Q0WX57 530 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 ORC2Q13416 577 aaPredicted RBP10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 SHROOM1Q2M3G4 852 aaPredicted RBP10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 ASPRV1Q53RT3 343 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 FAM83BQ5T0W9 1011 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 CCDC181Q5TID7 509 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 USP17L6PQ6QN14 398 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 ZNF572Q7Z3I7 529 aaPredicted RBP10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 GOLGA6L1Q8N7Z2 621 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 TSG101Q99816 390 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 RAB34Q9BZG1 259 aa10.21□□□□□ -0.78
TRIM49D1-202ENST00000530311 POLD4Q9HCU8 107 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms