RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 LRCH2Q5VUJ6 765 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 ADGRF4Q8IZF3 695 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 MMS19Q96T76 1030 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 RGL1Q9NZL6 768 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.23
SCN3B-206ENST00000530277 CEP57Q86XR8 500 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 MS4A14Q96JA4 679 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 CALUO43852 315 aaPredicted RBP13.58□□□□□ -0.24
SCN3B-206ENST00000530277 FLOT1O75955 427 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 IRX5P78411 483 aaPredicted RBP13.58□□□□□ -0.24
SCN3B-206ENST00000530277 MST1RQ04912 1400 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 GRM4Q14833 912 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 IFT20Q8IY31 132 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
SCN3B-206ENST00000530277 K7ENM7 598 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 C21orf2O43822 256 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 FAM102BQ5T8I3 360 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF526Q8TF50 670 aaPredicted RBP13.57□□□□□ -0.24
SCN3B-206ENST00000530277 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
SCN3B-206ENST00000530277 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 RGPD8O14715 1765 aaPredicted RBP13.57□□□□□ -0.24
SCN3B-206ENST00000530277 POTEJP0CG39 1038 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
SCN3B-206ENST00000530277 QRICH1Q2TAL8 776 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 RASSF4Q9H2L5 321 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 BBOX1O75936 387 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 ABL1P00519 1130 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 APBA1Q02410 837 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 GALNT17Q6IS24 598 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 SFR1Q86XK3 245 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 SYNCQ9H7C4 482 aa13.57□□□□□ -0.24
SCN3B-206ENST00000530277 MYMKA6NI61 221 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ACTN1P12814 892 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 PPP1R2P41236 205 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ERVK-24P63145 666 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 FLT1P17948 1338 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 SPATA31A1Q5TZJ5 1347 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 E7EVH7 732 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ORC4O43929 436 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 VIMP08670 466 aaKnown RBP13.56□□□□□ -0.24
SCN3B-206ENST00000530277 CHRNA5P30532 468 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 MESDQ14696 234 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 AK8Q96MA6 479 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 CHORDC1Q9UHD1 332 aaPredicted RBP13.56□□□□□ -0.24
SCN3B-206ENST00000530277 DAGLAQ9Y4D2 1042 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 H2AFZP0C0S5 128 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 H2AFVQ71UI9 128 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 CCDC172P0C7W6 258 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 CTNNA1P35221 906 aaKnown RBP13.56□□□□□ -0.24
SCN3B-206ENST00000530277 NFIAQ12857 509 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 GPATCH4Q5T3I0 446 aaKnown RBP13.56□□□□□ -0.24
SCN3B-206ENST00000530277 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF746Q6NUN9 644 aaPredicted RBP13.56□□□□□ -0.24
SCN3B-206ENST00000530277 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 ADSSL1Q8N142 457 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 INTS13Q9NVM9 706 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 GCNT4Q9P109 453 aa13.56□□□□□ -0.24
SCN3B-206ENST00000530277 PALMO75781 387 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 BMP3P12645 472 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 EIF2AK2P19525 551 aaKnown RBP13.55□□□□□ -0.24
SCN3B-206ENST00000530277 GBP6Q6ZN66 633 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 LACRTQ9GZZ8 138 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 THAP9Q9H5L6 903 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 ASIC3Q9UHC3 531 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 SLC37A4O43826 429 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TCP1P17987 556 aaKnown RBP13.55□□□□□ -0.24
SCN3B-206ENST00000530277 XKR9Q5GH70 373 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 ZNF512BQ96KM6 892 aaPredicted RBP13.55□□□□□ -0.24
SCN3B-206ENST00000530277 FNBP1Q96RU3 617 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TACC3Q9Y6A5 838 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 MORC2Q9Y6X9 1032 aaPredicted RBP13.55□□□□□ -0.24
SCN3B-206ENST00000530277 A0A1W2PRG0 241 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 STXBP3O00186 592 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TRIM49P0CI25 452 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 TRIM49CP0CI26 452 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 CETN2P41208 172 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 CRKP46108 304 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 SLCO1A2P46721 670 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 IFNAR2P48551 515 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 MAP3K9P80192 1104 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 COASYQ13057 564 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 PAK2Q13177 524 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 AOC3Q16853 763 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 EEPD1Q7L9B9 569 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 NEDD1Q8NHV4 660 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 CCPG1Q9ULG6 757 aa13.55□□□□□ -0.24
SCN3B-206ENST00000530277 F5H6K3 240 aa13.54□□□□□ -0.24
SCN3B-206ENST00000530277 KLRC3Q07444 240 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms