RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 SHTN1A0MZ66 631 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 CAP2P40123 477 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 TREML4Q6UXN2 200 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 SPATC1Q76KD6 591 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 UBE3DQ7Z6J8 389 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 NBPF11Q86T75 865 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 PHACTR4Q8IZ21 702 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 TMEM130Q8N3G9 435 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 ISL2Q96A47 359 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 ZNF669Q96BR6 464 aaPredicted RBP9.02□□□□□ -0.97
SVIP-204ENST00000530199 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
SVIP-204ENST00000530199 CDCA5Q96FF9 252 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
SVIP-204ENST00000530199 NR2E3Q9Y5X4 410 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 RIC1Q4ADV7 1423 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 RGS13O14921 159 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 SLC7A5Q01650 507 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 SLBPQ14493 270 aaKnown RBP eCLIP9.01□□□□□ -0.97
SVIP-204ENST00000530199 SLC4A8Q2Y0W8 1093 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 LCE2AQ5TA79 106 aaPredicted RBP9.01□□□□□ -0.97
SVIP-204ENST00000530199 ANKRD34AQ69YU3 496 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 KIAA1211LQ6NV74 962 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 FDX2Q6P4F2 183 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 C2CD4AQ8NCU7 369 aaPredicted RBP9.01□□□□□ -0.97
SVIP-204ENST00000530199 SUPT20HQ8NEM7 779 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 KLHL6Q8WZ60 621 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 KIF2CQ99661 725 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 DPH2Q9BQC3 489 aaPredicted RBP9.01□□□□□ -0.97
SVIP-204ENST00000530199 HTATIP2Q9BUP3 242 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
SVIP-204ENST00000530199 PIDD1Q9HB75 910 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 FANCLQ9NW38 375 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 POLKQ9UBT6 870 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 ACTL7BQ9Y614 415 aa9.01□□□□□ -0.97
SVIP-204ENST00000530199 WTIPA6NIX2 430 aaPredicted RBP9□□□□□ -0.97
SVIP-204ENST00000530199 F8W735 103 aaPredicted RBP9□□□□□ -0.97
SVIP-204ENST00000530199 DIAPH1O60610 1272 aaKnown RBP9□□□□□ -0.97
SVIP-204ENST00000530199 RAD17O75943 681 aa9□□□□□ -0.97
SVIP-204ENST00000530199 ASPAP45381 313 aa9□□□□□ -0.97
SVIP-204ENST00000530199 KIAA2012Q0VF49 1180 aa9□□□□□ -0.97
SVIP-204ENST00000530199 LRIT3Q3SXY7 679 aa9□□□□□ -0.97
SVIP-204ENST00000530199 GNPTABQ3T906 1256 aa9□□□□□ -0.97
SVIP-204ENST00000530199 PLEKHG4Q58EX7 1191 aa9□□□□□ -0.97
SVIP-204ENST00000530199 PRRT3Q5FWE3 981 aa9□□□□□ -0.97
SVIP-204ENST00000530199 Q7L0L9 218 aa9□□□□□ -0.97
SVIP-204ENST00000530199 UBE2Q1Q7Z7E8 422 aa9□□□□□ -0.97
SVIP-204ENST00000530199 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
SVIP-204ENST00000530199 SNX27Q96L92 541 aa9□□□□□ -0.97
SVIP-204ENST00000530199 DHRS1Q96LJ7 313 aa9□□□□□ -0.97
SVIP-204ENST00000530199 CCDC74BQ96LY2 380 aa9□□□□□ -0.97
SVIP-204ENST00000530199 CRAMP1Q96RY5 1269 aa9□□□□□ -0.97
SVIP-204ENST00000530199 FAM105AQ9NUU6 356 aa9□□□□□ -0.97
SVIP-204ENST00000530199 PFDN2Q9UHV9 154 aa9□□□□□ -0.97
SVIP-204ENST00000530199 ZNF652Q9Y2D9 606 aa9□□□□□ -0.97
SVIP-204ENST00000530199 ESYT3A0FGR9 886 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 RNGTTO60942 597 aaKnown RBP8.99□□□□□ -0.97
SVIP-204ENST00000530199 CDC45O75419 566 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 UBOX5O94941 541 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
SVIP-204ENST00000530199 BMP8BP34820 402 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 INHBEP58166 350 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 SQSTM1Q13501 440 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 TBC1D10BQ4KMP7 808 aaPredicted RBP8.99□□□□□ -0.97
SVIP-204ENST00000530199 C2orf27AQ580R0 203 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 PRAMEF13Q5VWM6 474 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 SHISA2Q6UWI4 295 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 TMEM192Q8IY95 271 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 THAP3Q8WTV1 239 aaPredicted RBP8.99□□□□□ -0.97
SVIP-204ENST00000530199 APPBP2Q92624 585 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 SLC6A18Q96N87 628 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 TMEM260Q9NX78 707 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 NOP53Q9NZM5 478 aaKnown RBP8.99□□□□□ -0.97
SVIP-204ENST00000530199 RAPGEFL1Q9UHV5 662 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 RPTORQ8N122 1335 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 PRUNE2Q8WUY3 3088 aa8.99□□□□□ -0.97
SVIP-204ENST00000530199 PRAMEF22A3QJZ6 481 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SUSD5O60279 629 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 RPS12P25398 132 aaKnown RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 PMS1P54277 932 aaKnown RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 SSRP1Q08945 709 aaKnown RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 GRIK4Q16099 956 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 BBS9Q3SYG4 887 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SLC9C1Q4G0N8 1177 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 HOMER1Q86YM7 354 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SMYD4Q8IYR2 804 aaPredicted RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 BAHD1Q8TBE0 780 aaPredicted RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 CD99L2Q8TCZ2 262 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 CYB5D2Q8WUJ1 264 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SHISA4Q96DD7 197 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 ZNF496Q96IT1 587 aaPredicted RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 TESK2Q96S53 571 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 EPN3Q9H201 632 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 LGR6Q9HBX8 967 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SSU72Q9NP77 194 aaKnown RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 GGA3Q9NZ52 723 aa8.98□□□□□ -0.97
SVIP-204ENST00000530199 SUCOQ9UBS9 1254 aaKnown RBP8.98□□□□□ -0.97
SVIP-204ENST00000530199 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms