RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 BICD2Q8TD16 824 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 PGBD1Q96JS3 809 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 MTG1Q9BT17 334 aaPredicted RBP14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 MLXIPQ9HAP2 919 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 SH3GLB2Q9NR46 395 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 VPS54Q9P1Q0 977 aa14.43□□□□□ -0.1
SNRNP35-206ENST00000529904 SPATA31C2B4DYI2 1134 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 MMP3P08254 477 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 CLTBP09497 229 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 ICAM3P32942 547 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 RBM25P49756 843 aaKnown RBP14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 NLRP5P59047 1200 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 PSMC6P62333 389 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 SP2Q02086 613 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 NEDD9Q14511 834 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 DGKDQ16760 1214 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 MYSM1Q5VVJ2 828 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 EMID1Q96A84 441 aaPredicted RBP14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 GPRASP2Q96D09 838 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 CDHR1Q96JP9 859 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 SPATA33Q96N06 139 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 TOX2Q96NM4 488 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 LBHD1Q9BQE6 289 aaPredicted RBP14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 PDLIM7Q9NR12 457 aa14.42□□□□□ -0.1
SNRNP35-206ENST00000529904 CLK2P49760 499 aaKnown RBP14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 CDK7P50613 346 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 CHMP4BP1P59074 171 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 MTMR1Q13613 665 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 ME3Q16798 604 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 NECAB1Q8N987 351 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 TMEM39AQ9NV64 488 aa14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 COLQQ9Y215 455 aaPredicted RBP14.41□□□□□ -0.1
SNRNP35-206ENST00000529904 NOP56O00567 594 aaKnown RBP14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 LARGE1O95461 756 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 XBP1P17861 261 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 ITGB5P18084 799 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 ZNF76P36508 570 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 SREBF1P36956 1147 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 MAGEA10P43363 369 aaPredicted RBP14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 FAAP100Q0VG06 881 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 FAM47CQ5HY64 1035 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 CYFIP1Q7L576 1253 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 SH3RF1Q7Z6J0 888 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 SLC43A3Q8NBI5 491 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 GIMAP8Q8ND71 665 aaPredicted RBP14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 GTF3C6Q969F1 213 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 UBIAD1Q9Y5Z9 338 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 GRIN2DO15399 1336 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
SNRNP35-206ENST00000529904 TRIM43BA6NCK2 446 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 MAFGO15525 162 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 PPFIA4O75335 1185 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 RAG1P15918 1043 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 ARHGAP4P98171 946 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 MDM2Q00987 491 aaPredicted RBP14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 SP4Q02446 784 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 SEMA3FQ13275 785 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 HSDL1Q3SXM5 330 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 METTL7BQ6UX53 244 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 FAM126BQ8IXS8 530 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 FAM177A1Q8N128 213 aaPredicted RBP14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 WASF1Q92558 559 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 TRIM43Q96BQ3 446 aaPredicted RBP14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 AIFM3Q96NN9 605 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 KIF2CQ99661 725 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 SENP7Q9BQF6 1050 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 MXRA8Q9BRK3 442 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 PKD2L1Q9P0L9 805 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 ORC3Q9UBD5 711 aaPredicted RBP14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 LIMCH1Q9UPQ0 1083 aa14.39□□□□□ -0.11
SNRNP35-206ENST00000529904 ADAMTS3O15072 1205 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 DTNBO60941 627 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 CTDNEP1O95476 244 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 ZNF286BP0CG31 522 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 RABEP1Q15276 862 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 CEP55Q53EZ4 464 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 GALNT17Q6IS24 598 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 RASGRP4Q8TDF6 673 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 GDF15Q99988 308 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 TRPV6Q9H1D0 765 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 BCAS3Q9H6U6 928 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 KCNH7Q9NS40 1196 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 PCDHA4Q9UN74 947 aa14.38□□□□□ -0.11
SNRNP35-206ENST00000529904 KIAA0355O15063 1070 aa14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 ST18O60284 1047 aa14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 B4GALT4O60513 344 aa14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 CD4P01730 458 aa14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 HOXD8P13378 290 aaPredicted RBP14.37□□□□□ -0.11
SNRNP35-206ENST00000529904 KCNA2P16389 499 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms