RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 HAS3O00219 553 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 CAND2O75155 1236 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 EIF3JO75822 258 aaKnown RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 FGRP09769 529 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 IRS1P35568 1242 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 MKRN4PQ13434 485 aaPredicted RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 SMAD2Q15796 467 aaKnown RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 PKN1Q16512 942 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 HERC4Q5GLZ8 1057 aaPredicted RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 RPAINQ86UA6 219 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 SYTL5Q8TDW5 730 aaPredicted RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 WNT8BQ93098 351 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 TTC14Q96N46 770 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 IFIH1Q9BYX4 1025 aaKnown RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 MUTYHQ9UIF7 546 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
COPB1-207ENST00000529866 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
COPB1-207ENST00000529866 FOXP2O15409 715 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 ST18O60284 1047 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 HOXD8P13378 290 aaPredicted RBP12.19□□□□□ -0.46
COPB1-207ENST00000529866 CTNNB1P35222 781 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
COPB1-207ENST00000529866 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
COPB1-207ENST00000529866 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 KCNV1Q6PIU1 500 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 SERINC5Q86VE9 423 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 TOP1MTQ969P6 601 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
COPB1-207ENST00000529866 LMAN2LQ9H0V9 348 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
COPB1-207ENST00000529866 C17orf102A2RUQ5 167 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 UPP2O95045 317 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 RB1P06400 928 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 PCP11498 1178 aaKnown RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 EIF2AK2P19525 551 aaKnown RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 ALX1Q15699 326 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 FIBCD1Q8N539 461 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 APBB2Q92870 758 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 ATP6V0A1Q93050 837 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
COPB1-207ENST00000529866 SIP14410 1827 aa12.18□□□□□ -0.46
COPB1-207ENST00000529866 COL4A6Q14031 1691 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 MBTPS2O43462 519 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 NR3C2P08235 984 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 CLUL1Q15846 466 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 BMP8AQ7Z5Y6 402 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 EDAQ92838 391 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 COL20A1Q9P218 1284 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 PTPRSQ13332 1948 aa12.17□□□□□ -0.46
COPB1-207ENST00000529866 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 ZFHX2Q9C0A1 2572 aaPredicted RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 C5orf67F2Z3F1 127 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 STXBP3O00186 592 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 DHX16O60231 1041 aaKnown RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 CTSHP09668 335 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 GOLGA8HP0CJ92 632 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 HSPD1P10809 573 aaKnown RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 GNAT1P11488 350 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 MX1P20591 662 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 LTBRP36941 435 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 CELF3Q5SZQ8 465 aaKnown RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 MFSD6Q6ZSS7 791 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 PBXIP1Q96AQ6 731 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 PXMP2Q9NR77 195 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 HELLSQ9NRZ9 838 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 CD207Q9UJ71 328 aa12.16□□□□□ -0.46
COPB1-207ENST00000529866 TRIP12Q14669 1992 aaPredicted RBP12.16□□□□□ -0.46
COPB1-207ENST00000529866 ZMYM6O95789 1325 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 PTPRZ1P23471 2315 aaPredicted RBP12.15□□□□□ -0.46
COPB1-207ENST00000529866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
COPB1-207ENST00000529866 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 M0R296 226 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 GGPS1O95749 300 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 CFBP00751 764 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 FGAP02671 866 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 BMPR1AP36894 532 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 NDUFV1P49821 464 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 NT5C2P49902 561 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 RRP1P56182 461 aaKnown RBP12.15□□□□□ -0.46
COPB1-207ENST00000529866 HYAL1Q12794 435 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 HSDL1Q3SXM5 330 aa12.15□□□□□ -0.46
COPB1-207ENST00000529866 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms