RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ORC4O43929 436 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 CXCL10P02778 98 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 MMP3P08254 477 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 CKBP12277 381 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 NOVP48745 357 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 RBL2Q08999 1139 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 CHST3Q7LGC8 479 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 ZNF687Q8N1G0 1237 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 NSUN6Q8TEA1 469 aaKnown RBP10.55□□□□□ -0.72
VPS11-203ENST00000529545 TMEM47Q9BQJ4 181 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
VPS11-203ENST00000529545 NBNO60934 754 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 ARIH2O95376 493 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 AMHP03971 560 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 NUDT7P0C024 238 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 PDHBP11177 359 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 IL9P15248 144 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 ZNF543Q08ER8 600 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 PTK7Q13308 1070 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 GPNMBQ14956 572 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 STXBP2Q15833 593 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 LY6KQ17RY6 165 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 USH1GQ495M9 461 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 TIGD5Q53EQ6 642 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
VPS11-203ENST00000529545 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.54□□□□□ -0.72
VPS11-203ENST00000529545 TTC14Q96N46 770 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 SAMD11Q96NU1 681 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 MAF1Q9H063 256 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 KCNH6Q9H252 994 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 HDAC6Q9UBN7 1215 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 GTF2IRD1Q9UHL9 959 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
VPS11-203ENST00000529545 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 GRXCR2A6NFK2 248 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 DCXO43602 365 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 LGR5O75473 907 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 FGRP09769 529 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 PSEN2P49810 448 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 MRE11P49959 708 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 ARHGAP1Q07960 439 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 EP400NLQ6ZTU2 488 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 MCF2L2Q86YR7 1114 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 DHX38Q92620 1227 aaKnown RBP10.53□□□□□ -0.72
VPS11-203ENST00000529545 KAT2BQ92831 832 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 MRPL38Q96DV4 380 aaKnown RBP10.53□□□□□ -0.72
VPS11-203ENST00000529545 IWS1Q96ST2 819 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 C17orf80Q9BSJ5 609 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 UPF3BQ9BZI7 483 aaKnown RBP10.53□□□□□ -0.72
VPS11-203ENST00000529545 RCAN3Q9UKA8 241 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 BRWD1Q9NSI6 2320 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 ABCB11O95342 1321 aa10.53□□□□□ -0.72
VPS11-203ENST00000529545 MFSD10Q14728 455 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 ALX1Q15699 326 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 KIAA0753Q2KHM9 967 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
VPS11-203ENST00000529545 ZNF618Q5T7W0 954 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 ARHGEF16Q5VV41 709 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 PI4K2BQ8TCG2 481 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 TAAR1Q96RJ0 339 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 CTAGE1Q96RT6 745 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 RMDN3Q96TC7 470 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 PRKAG3Q9UGI9 489 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 MRVI1Q9Y6F6 885 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 KIAA1217Q5T5P2 1943 aa10.52□□□□□ -0.73
VPS11-203ENST00000529545 RSPH10B2B2RC85 870 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 H3BQ06 376 aaPredicted RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 FOXP2O15409 715 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 EIF3JO75822 258 aaKnown RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 RSPH10BP0C881 870 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 MX1P20591 662 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 THPOP40225 353 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 GPM6BQ13491 265 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS11-203ENST00000529545 MFSD6Q6ZSS7 791 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 SPNS2Q8IVW8 549 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 BANK1Q8NDB2 785 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 DBF4BQ8NFT6 615 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 NEK9Q8TD19 979 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 PABPC5Q96DU9 382 aaKnown RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 YME1L1Q96TA2 773 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
VPS11-203ENST00000529545 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
VPS11-203ENST00000529545 H3BNC9 293 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 NCK2O43639 380 aa10.5□□□□□ -0.73
VPS11-203ENST00000529545 DHX16O60231 1041 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms