RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SP2Q02086 613 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 C7orf31Q8N865 590 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 KATNAL1Q9BW62 490 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 ZSWIM6Q9HCJ5 1215 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 FAM217BQ9NTX9 383 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-216ENST00000528739 PDRG1Q9NUG6 133 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 CEP290O15078 2479 aa16.39■□□□□ 0.21
CAPN1-216ENST00000528739 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 ZNF286BP0CG31 522 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 ACRP10323 421 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 EPHB4P54760 987 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 STK3Q13188 491 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 NEDD9Q14511 834 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 HSDL1Q3SXM5 330 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 MYSM1Q5VVJ2 828 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 XRRA1Q6P2D8 792 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 NFRKBQ6P4R8 1299 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-216ENST00000528739 RETREG2Q8NC44 543 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 PHKBQ93100 1093 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 SLC26A6Q9BXS9 759 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
CAPN1-216ENST00000528739 STXBP3O00186 592 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 CPLX1O14810 134 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 EIF5BO60841 1220 aaKnown RBP16.37■□□□□ 0.21
CAPN1-216ENST00000528739 SCG2P13521 617 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 PDIA3P30101 505 aaKnown RBP16.37■□□□□ 0.21
CAPN1-216ENST00000528739 ZNF76P36508 570 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 PSEN2P49810 448 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 FUT2Q10981 343 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 PTGISQ16647 500 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 EMID1Q96A84 441 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-216ENST00000528739 INPP4AQ96PE3 977 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-216ENST00000528739 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
CAPN1-216ENST00000528739 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
CAPN1-216ENST00000528739 DNAH12Q6ZR08 3092 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 SPATA31C2B4DYI2 1134 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 ICAM3P32942 547 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 PTPN11Q06124 597 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-216ENST00000528739 MFSD10Q14728 455 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 PFKFB3Q16875 520 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-216ENST00000528739 KIAA0753Q2KHM9 967 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 UTP14CQ5TAP6 766 aaKnown RBP16.36■□□□□ 0.21
CAPN1-216ENST00000528739 JAKMIP3Q5VZ66 844 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 TYW1BQ6NUM6 668 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-216ENST00000528739 SCLYQ96I15 445 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 CDHR1Q96JP9 859 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
CAPN1-216ENST00000528739 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 GLT8D2Q9H1C3 349 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 BCAS3Q9H6U6 928 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 C6orf50Q9HD87 102 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 FRMPD4Q14CM0 1322 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 UMODL1Q5DID0 1318 aa16.36■□□□□ 0.21
CAPN1-216ENST00000528739 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 FOSP01100 380 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 MTMR1Q13613 665 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 CPLX2Q6PUV4 134 aaKnown RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 ZNF365Q70YC5 407 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 RPUSD2Q8IZ73 545 aaKnown RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 FBXL16Q8N461 479 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 DEFB123Q8N688 67 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 KAT2BQ92831 832 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPN1-216ENST00000528739 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 TMEM260Q9NX78 707 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 HDAC6Q9UBN7 1215 aa16.35■□□□□ 0.21
CAPN1-216ENST00000528739 FGBP02675 491 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 BFSP2Q13515 415 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 GDF6Q6KF10 455 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-216ENST00000528739 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-216ENST00000528739 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 Q7L0L9 218 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 DEFB128Q7Z7B8 93 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 CCDC155Q8N6L0 562 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 FAM161BQ96MY7 647 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 MTIF3Q9H2K0 278 aaKnown RBP16.34■□□□□ 0.21
CAPN1-216ENST00000528739 IL23AQ9NPF7 189 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 TRIOBPQ9H2D6 2365 aa16.34■□□□□ 0.21
CAPN1-216ENST00000528739 ZBBXA8MT70 800 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 ITGB5P18084 799 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 GNA11P29992 359 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 NLRP5P59047 1200 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 SEMA3FQ13275 785 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 TMEM240Q5SV17 173 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 OTOP2Q7RTS6 562 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms