RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TSGA10Q9BZW7 698 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 SNX12Q9UMY4 172 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 PCDHA12Q9UN75 941 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 CARSP49589 748 aaKnown RBP19.61■□□□□ 0.73
LTBP3-210ENST00000528516 CCDC174Q6PII3 467 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 CCDC65Q8IXS2 484 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 CYFIP2Q96F07 1278 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 OR52Z1P0C646 297 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 SKOR1P84550 965 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 EHHADHQ08426 723 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 DPYDQ12882 1025 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 HS2ST1Q7LGA3 356 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 TPH2Q8IWU9 490 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 SGSM3Q96HU1 749 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 LIMA1Q9UHB6 759 aaKnown RBP19.61■□□□□ 0.73
LTBP3-210ENST00000528516 TPX2Q9ULW0 747 aaKnown RBP19.61■□□□□ 0.73
LTBP3-210ENST00000528516 SLIT3O75094 1523 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 UTYO14607 1347 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 ANO9A1A5B4 782 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 GCNT3O95395 438 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 TCP1P17987 556 aaKnown RBP19.6■□□□□ 0.73
LTBP3-210ENST00000528516 STAG2Q8N3U4 1231 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 CETN3O15182 167 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 ZKSCAN8Q15776 578 aaPredicted RBP19.6■□□□□ 0.73
LTBP3-210ENST00000528516 GOLGA6L10A0A0M3HER8 536 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 ENO4A6NNW6 628 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 C21orf2O43822 256 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 CETN1Q12798 172 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 TNIP1Q15025 636 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 OSBPL9Q96SU4 736 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 TCHPQ9BT92 498 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 RWDD2AQ9UIY3 292 aa19.6■□□□□ 0.73
LTBP3-210ENST00000528516 A0A087X0B3 334 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 CCDC189A1A4V9 331 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 RCCD1A6NED2 376 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 EIF4E1BA6NMX2 242 aaKnown RBP19.59■□□□□ 0.73
LTBP3-210ENST00000528516 FAM107AO95990 144 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 PABPC4Q13310 644 aaKnown RBP eCLIP19.59■□□□□ 0.73
LTBP3-210ENST00000528516 KRT12Q99456 494 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 ZSCAN5CA6NGD5 496 aaPredicted RBP19.59■□□□□ 0.73
LTBP3-210ENST00000528516 PLCG1P19174 1290 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 NEK8Q86SG6 692 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 MS4A14Q96JA4 679 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 LSM14BQ9BX40 385 aaKnown RBP19.59■□□□□ 0.73
LTBP3-210ENST00000528516 PLAAQ9Y263 795 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 OPLAHO14841 1288 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 KIF4AO95239 1232 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 CFAP221Q4G0U5 840 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 FAM196AQ6ZSG2 479 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 KRT25Q7Z3Z0 450 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 ARMC2Q8NEN0 867 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 RNF217Q8TC41 542 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 ATP6V1G3Q96LB4 118 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 CPSF2Q9P2I0 782 aaKnown RBP19.59■□□□□ 0.73
LTBP3-210ENST00000528516 KIAA1024Q9UPX6 916 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 CPDO75976 1380 aa19.59■□□□□ 0.73
LTBP3-210ENST00000528516 TMOD1P28289 359 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 CYP2J2P51589 502 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 IRX1P78414 480 aaPredicted RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 PRKG1Q13976 671 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 SLC9C1Q4G0N8 1177 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 GKAP1Q5VSY0 366 aaPredicted RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 KDM7AQ6ZMT4 941 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 GPBP1Q86WP2 473 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 FUKQ8N0W3 1084 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 RBM12Q9NTZ6 932 aaKnown RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 RGPD5Q99666 1765 aa19.58■□□□□ 0.73
LTBP3-210ENST00000528516 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 EPB41L4AQ9HCS5 686 aaPredicted RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 ARPP21Q9UBL0 812 aaPredicted RBP19.58■□□□□ 0.73
LTBP3-210ENST00000528516 GMNCA6NCL1 334 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 CYP19A1P11511 503 aaPredicted RBP19.58■□□□□ 0.72
LTBP3-210ENST00000528516 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.72
LTBP3-210ENST00000528516 PLCG2P16885 1265 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 MMGT1Q8N4V1 131 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 KIF9Q9HAQ2 790 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 CAPN6Q9Y6Q1 641 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 KIF1AQ12756 1690 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 CAMTA1Q9Y6Y1 1673 aa19.58■□□□□ 0.72
LTBP3-210ENST00000528516 H7C1D1 291 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 KCNK3O14649 394 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 FTCDO95954 541 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 PRCPP42785 496 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 VPS41P49754 854 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 PLCB3Q01970 1234 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 IGDCC4Q8TDY8 1250 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 POTEMA6NI47 508 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 FAM153BP0C7A2 387 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 CTNNA1P35221 906 aaKnown RBP19.57■□□□□ 0.72
LTBP3-210ENST00000528516 FAM153CQ494X1 144 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 EGFL6Q8IUX8 553 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 MYCT1Q8N699 235 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 FAM153AQ9UHL3 310 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 SFI1A8K8P3 1242 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 CTNNA2P26232 953 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 KLK7P49862 253 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 DNM2P50570 870 aa19.57■□□□□ 0.72
LTBP3-210ENST00000528516 ELOA2Q8IYF1 753 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms