RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 VPS16Q9H269 839 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TUFT1Q9NNX1 390 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 PANK4Q9NVE7 773 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 FAM86B1E9PN63 330 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 MFAP3LO75121 409 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 FAM86B2P0C5J1 330 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 FCER1AP12319 257 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 IDEP14735 1019 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 PMS1P54277 932 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 UBXN1Q04323 297 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 RBL2Q08999 1139 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 R3HDM1Q15032 1099 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 ECM1Q16610 540 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 NIPA1Q7RTP0 329 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TMTC1Q8IUR5 882 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 MB21D1Q8N884 522 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 KIAA0895Q8NCT3 520 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 P2RX7Q99572 595 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TUBGCP2Q9BSJ2 902 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 SLC39A2Q9NP94 309 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TRMT1Q9NXH9 659 aaKnown RBP16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TAB2Q9NYJ8 693 aa16.45■□□□□ 0.22
ECHDC1-220ENST00000528402 TRIM49BA6NDI0 452 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 HSD17B4P51659 736 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 PPP2R5CQ13362 524 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 DYMQ7RTS9 669 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 KCNK18Q7Z418 384 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 CATSPER3Q86XQ3 398 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 MYOCDQ8IZQ8 938 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 SYT2Q8N9I0 419 aaPredicted RBP16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 WDR11Q9BZH6 1224 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 GJA3Q9Y6H8 435 aa16.44■□□□□ 0.22
ECHDC1-220ENST00000528402 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 FRMD3A2A2Y4 597 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 USP27XA6NNY8 438 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 ZBED4O75132 1171 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 MED24O75448 989 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 GNA14O95837 355 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 BCRP11274 1271 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 SLC12A3P55017 1021 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 COASYQ13057 564 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 SYCP1Q15431 976 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 FIGNQ5HY92 759 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 FAM26FQ5R3K3 315 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 FKBP15Q5T1M5 1219 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 GPBP1Q86WP2 473 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 SLC5A5Q92911 643 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 VAV3Q9UKW4 847 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
ECHDC1-220ENST00000528402 C19orf81C9J6K1 198 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 E9PMD0 336 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 MEIS1O00470 390 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 EYA4O95677 639 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 PRKCSHP14314 528 aaPredicted RBP16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 CYP11B2P19099 503 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 CASP14P31944 242 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 INPP5BP32019 993 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 MTIF2P46199 727 aaKnown RBP16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 FKBP3Q00688 224 aaKnown RBP16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 OTOP1Q7RTM1 612 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 CEP63Q96MT8 703 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 RIT2Q99578 217 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 SEMA6BQ9H3T3 888 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 PPP2R2CQ9Y2T4 447 aa16.42■□□□□ 0.22
ECHDC1-220ENST00000528402 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 PHLPP2Q6ZVD8 1323 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 POTEB3A0JP26 581 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 POTECB2RU33 542 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 GYPCP04921 128 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 KRT18P05783 430 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 CCDC175P0C221 793 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 SPATA31C1P0DKV0 1188 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 ETF1P62495 437 aaKnown RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 LRCH2Q5VUJ6 765 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 POTEBQ6S5H4 581 aa16.41■□□□□ 0.22
ECHDC1-220ENST00000528402 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms