RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	FIBP	O43427	364 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	ICAM3	P32942	547 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	NAPA	P54920	295 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	TOB2	Q14106	344 aa	Predicted RBP	13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	HSDL1	Q3SXM5	330 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	FAM47C	Q5HY64	1035 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	PPP1R18	Q6NYC8	613 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	XRRA1	Q6P2D8	792 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	SPATA33	Q96N06	139 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	UPF3B	Q9BZI7	483 aa	Known RBP	13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	TM6SF1	Q9BZW5	370 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	BCAS3	Q9H6U6	928 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	BARHL2	Q9NY43	387 aa		13.51	□□□□□ -0.25
PSMC3-205	ENST00000528362	SPATA31C2	B4DYI2	1134 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	hCG_1984214	I3L0E3	225 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	F2	P00734	622 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	SUPT20HL2	P0C7V6	817 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	ZNF286B	P0CG31	522 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	CYP2C9	P11712	490 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	CSF2RA	P15509	400 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	PDIA3	P30101	505 aa	Known RBP	13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	ADCY7	P51828	1080 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	PPIG	Q13427	754 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	PFKFB3	Q16875	520 aa	Predicted RBP	13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	C16orf59	Q7L2K0	433 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	TMEM199	Q8N511	208 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	ZNF713	Q8N859	430 aa	Predicted RBP	13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	WNT8A	Q9H1J5	351 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	RIC8A	Q9NPQ8	531 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	PCDHA6	Q9UN73	950 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	PCDHA8	Q9Y5H6	950 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	CYP46A1	Q9Y6A2	500 aa		13.5	□□□□□ -0.25
PSMC3-205	ENST00000528362	SPDYE3	A6NKU9	549 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	SCG2	P13521	617 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	ITGB5	P18084	799 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	CCL23	P55773	120 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	CHMP4BP1	P59074	171 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	PTPN11	Q06124	597 aa	Predicted RBP	13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	NTRK3	Q16288	839 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	PKN1	Q16512	942 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	GPR153	Q6NV75	609 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	METTL7B	Q6UX53	244 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	SESTD1	Q86VW0	696 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	TEX2	Q8IWB9	1127 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	RNPC3	Q96LT9	517 aa	Known RBP	13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	CTAGE1	Q96RT6	745 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	MLXIP	Q9HAP2	919 aa		13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	NCOA5	Q9HCD5	579 aa	Known RBP	13.49	□□□□□ -0.25
PSMC3-205	ENST00000528362	SMCO2	A6NFE2	343 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	HAS3	O00219	553 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	PPFIA3	O75145	1194 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	PPFIA4	O75335	1185 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	ACR	P10323	421 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	PSEN2	P49810	448 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	NEDD9	Q14511	834 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	MFSD10	Q14728	455 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	TMEM240	Q5SV17	173 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	GDF6	Q6KF10	455 aa	Predicted RBP	13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	CYFIP1	Q7L576	1253 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	NLRX1	Q86UT6	975 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	PHKB	Q93100	1093 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	GPRASP2	Q96D09	838 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	PGBD1	Q96JS3	809 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.48	□□□□□ -0.25	1e-10	■□□□□ 10.4
PSMC3-205	ENST00000528362	LARP6	Q9BRS8	491 aa	Known RBP	13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	C16orf70	Q9BSU1	422 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	KATNAL1	Q9BW62	490 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	TMEM260	Q9NX78	707 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	TELO2	Q9Y4R8	837 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	UBIAD1	Q9Y5Z9	338 aa		13.48	□□□□□ -0.25
PSMC3-205	ENST00000528362	ADAMTS3	O15072	1205 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	PRPF3	O43395	683 aa	Known RBP	13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	KCNA2	P16389	499 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	IFNAR1	P17181	557 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	CLK2	P49760	499 aa	Known RBP	13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	CCT2	P78371	535 aa	Known RBP	13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	KIAA0753	Q2KHM9	967 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362		Q7L0L9	218 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	VWCE	Q96DN2	955 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	GPR20	Q99678	358 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	SENP7	Q9BQF6	1050 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	ALG1	Q9BT22	464 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	ANO3	Q9BYT9	981 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	IL23A	Q9NPF7	189 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	JADE2	Q9NQC1	790 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	PDRG1	Q9NUG6	133 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	HDAC6	Q9UBN7	1215 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	GTF2IRD1	Q9UHL9	959 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	SCN10A	Q9Y5Y9	1956 aa		13.47	□□□□□ -0.25
PSMC3-205	ENST00000528362	ESYT2	A0FGR8	921 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	NOP56	O00567	594 aa	Known RBP	13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	ATP9A	O75110	1047 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	FOS	P01100	380 aa	Predicted RBP	13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	LGALS2	P05162	132 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	AP3B2	Q13367	1082 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	MTMR1	Q13613	665 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	PTGIS	Q16647	500 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	RASIP1	Q5U651	963 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	ZNF365	Q70YC5	407 aa		13.46	□□□□□ -0.25
PSMC3-205	ENST00000528362	TRIM50	Q86XT4	487 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms