RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RREB1Q92766 1687 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 KRT18P05783 430 aaKnown RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 CREG2Q8IUH2 290 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 ZSCAN29Q8IWY8 852 aaPredicted RBP8.26□□□□□ -1.09
C11orf54-207ENST00000528288 C10orf67Q8IYJ2 551 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 ERGIC2Q96RQ1 377 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 SELENOOQ9BVL4 669 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 HPCAL4Q9UM19 191 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 PCDHA12Q9UN75 941 aa8.26□□□□□ -1.09
C11orf54-207ENST00000528288 POTEFA5A3E0 1075 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 POTEIP0CG38 1075 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 PSMC6P62333 389 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 DDR1Q08345 913 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 TUBB2AQ13885 445 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 MAN2A1Q16706 1144 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 HERC4Q5GLZ8 1057 aaPredicted RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 POTEGQ6S5H5 508 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 POTEEQ6S8J3 1075 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 LRRC55Q6ZSA7 311 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 TUBB2BQ9BVA1 445 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 CUEDC2Q9H467 287 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 RSPH14Q9UHP6 348 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 PLAGL2Q9UPG8 496 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 DDX60LQ5H9U9 1706 aaKnown RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 SFI1A8K8P3 1242 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 USO1O60763 962 aaKnown RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 MYL1P05976 194 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 IL1R1P14778 569 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 CASP5P51878 434 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 CYP4A11Q02928 519 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 IKQ13123 557 aaPredicted RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 RAPGEF1Q13905 1077 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 TRADDQ15628 312 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 VPS72Q15906 364 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 CCDC181Q5TID7 509 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 GPBP1Q86WP2 473 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 MYOCDQ8IZQ8 938 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 EXOC4Q96A65 974 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 SH2D4AQ9H788 454 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 NRAPQ86VF7 1730 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 G3V3G9 751 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 TACC1O75410 805 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 ZNF543Q08ER8 600 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 KIAA0825Q8IV33 1275 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 CCDC170Q8IYT3 715 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 FAM133AQ8N9E0 248 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 BAP1Q92560 729 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 DNAJC19Q96DA6 116 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 RBM17Q96I25 401 aaKnown RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 P2RX7Q99572 595 aaKnown RBP8.25□□□□□ -1.09
C11orf54-207ENST00000528288 GBP3Q9H0R5 595 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 SERPINB13Q9UIV8 391 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 SNX12Q9UMY4 172 aa8.25□□□□□ -1.09
C11orf54-207ENST00000528288 VGLL3A8MV65 326 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 TLR2O60603 784 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 GDF11O95390 407 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 HOXA13P31271 388 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 SHMT1P34896 483 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 FAM26FQ5R3K3 315 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 CCNI2Q6ZMN8 369 aaPredicted RBP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 TBC1D5Q92609 795 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PNMA6FA0A0J9YX94 578 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 TTLL1O95922 423 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 ACTN2P35609 894 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PRR16Q569H4 304 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 CDC42EP5Q6NZY7 148 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 WDR93Q6P2C0 686 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 LEKR1Q6ZMV7 388 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 SPATA4Q8NEY3 305 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 IFT81Q8WYA0 676 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 RBM12Q9NTZ6 932 aaKnown RBP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 ADAMTS1Q9UHI8 967 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 UBAP1LF5GYI3 381 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 MED24O75448 989 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PLA2G4BP0C869 781 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PLCG2P16885 1265 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 TAF3Q5VWG9 929 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PDXDC1Q6P996 788 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 SPICE1Q8N0Z3 855 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 GUF1Q8N442 669 aaKnown RBP8.24□□□□□ -1.09
C11orf54-207ENST00000528288 RETREG2Q8NC44 543 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 CYP2W1Q8TAV3 490 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 CUL5Q93034 780 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 TSG101Q99816 390 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 PCDHA1Q9Y5I3 950 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 NAV1Q8NEY1 1877 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 MYH1P12882 1939 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 AGPSO00116 658 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 NOL4O94818 638 aa8.24□□□□□ -1.09
C11orf54-207ENST00000528288 UBXN2AP68543 259 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms