RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 AVPR2P30518 371 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 CDK7P50613 346 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 TERF1P54274 439 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 USP14P54578 494 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 VCPP55072 806 aaKnown RBP4.9□□□□□ -1.63
CHD7-205ENST00000527825 FKBP5Q13451 457 aaPredicted RBP4.9□□□□□ -1.63
CHD7-205ENST00000527825 SUZ12Q15022 739 aaKnown RBP4.9□□□□□ -1.63
CHD7-205ENST00000527825 PTPROQ16827 1216 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 C4orf17Q53FE4 359 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 CATSPERGQ6ZRH7 1159 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 HERC6Q8IVU3 1022 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 SHCBP1Q8NEM2 672 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 KCNG4Q8TDN1 519 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 DNAAF4Q8WXU2 420 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 LENG1Q96BZ8 264 aaPredicted RBP4.9□□□□□ -1.63
CHD7-205ENST00000527825 RMDN1Q96DB5 314 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 SCLYQ96I15 445 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 HINFPQ9BQA5 517 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 NOL10Q9BSC4 688 aaKnown RBP4.9□□□□□ -1.63
CHD7-205ENST00000527825 FTOQ9C0B1 505 aaKnown RBP eCLIP4.9□□□□□ -1.63
CHD7-205ENST00000527825 MROH8Q9H579 483 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 VRTNQ9H8Y1 702 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 GINM1Q9NU53 330 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 BTBD7Q9P203 1132 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 UMODL1Q5DID0 1318 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 ROBO3Q96MS0 1386 aa4.9□□□□□ -1.63
CHD7-205ENST00000527825 ZFHX2Q9C0A1 2572 aaPredicted RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 PTPRZ1P23471 2315 aaPredicted RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 C5orf42Q9H799 3197 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 STXBP3O00186 592 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 LPXNO60711 386 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 CD4P01730 458 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 IGHA2P01877 340 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 XRCC6P12956 609 aaKnown RBP eCLIP4.89□□□□□ -1.63
CHD7-205ENST00000527825 RFX1P22670 979 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 NBL1P41271 181 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 GNAI1P63096 354 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 ZXDAP98168 799 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 BECN1Q14457 450 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 TTLL4Q14679 1199 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 PUM3Q15397 648 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 TIGD5Q53EQ6 642 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 SPTY2D1Q68D10 685 aaPredicted RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 FRMD5Q7Z6J6 570 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 CCDC146Q8IYE0 955 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 ABRAQ8N0Z2 381 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 SIX5Q8N196 739 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 KLHDC9Q8NEP7 349 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 NEDD1Q8NHV4 660 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 NEK9Q8TD19 979 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 PABPC5Q96DU9 382 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 TGS1Q96RS0 853 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 MMP19Q99542 508 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 TINF2Q9BSI4 451 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 NOC4LQ9BVI4 516 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 MOV10L1Q9BXT6 1211 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 NIFKQ9BYG3 293 aaKnown RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 KRTAP4-6Q9BYQ5 205 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 CLDND1Q9NY35 253 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 C9orf78Q9NZ63 289 aaPredicted RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 PI4KBQ9UBF8 816 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 ABCF2Q9UG63 623 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 ZHX1Q9UKY1 873 aaPredicted RBP4.89□□□□□ -1.63
CHD7-205ENST00000527825 DENND2AQ9ULE3 1009 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 CNTNAP5Q8WYK1 1306 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 KIF16BQ96L93 1317 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 FAM186AA6NE01 2351 aa4.89□□□□□ -1.63
CHD7-205ENST00000527825 A0A1B0GUL7 405 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 DUSP11O75319 330 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 DKK1O94907 266 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 MAP4K4O95819 1239 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 LDHCP07864 332 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 TAL1P17542 331 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 CST5P28325 142 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 EPHA4P54764 986 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SIGLEC14Q08ET2 396 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 PTK7Q13308 1070 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 UBAP2LQ14157 1087 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 RRP1BQ14684 758 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 CLUL1Q15846 466 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 CRTC2Q53ET0 693 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 ATF7IPQ6VMQ6 1270 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 LBX2Q6XYB7 198 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 NOL8Q76FK4 1167 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 HOMEZQ8IX15 550 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 KIAA2013Q8IYS2 634 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 TRMT2AQ8IZ69 625 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 RETREG2Q8NC44 543 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 C12orf42Q96LP6 360 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SEZ6LQ9BYH1 1024 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 TANGO6Q9C0B7 1094 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SPATC1LQ9H0A9 340 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 SIL1Q9H173 461 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 WNT8AQ9H1J5 351 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 PDCL3Q9H2J4 239 aa4.88□□□□□ -1.63
CHD7-205ENST00000527825 DHX36Q9H2U1 1008 aaKnown RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 RPAP3Q9H6T3 665 aaPredicted RBP4.88□□□□□ -1.63
CHD7-205ENST00000527825 RUBCNLQ9H714 662 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms