RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 CELF3Q5SZQ8 465 aaKnown RBP19.35■□□□□ 0.69
NR1H3-229ENST00000527464 MYSM1Q5VVJ2 828 aa19.35■□□□□ 0.69
NR1H3-229ENST00000527464 MCTP2Q6DN12 878 aa19.35■□□□□ 0.69
NR1H3-229ENST00000527464 NLRX1Q86UT6 975 aa19.35■□□□□ 0.69
NR1H3-229ENST00000527464 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
NR1H3-229ENST00000527464 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
NR1H3-229ENST00000527464 GGPS1O95749 300 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 HOXD8P13378 290 aaPredicted RBP19.34■□□□□ 0.69
NR1H3-229ENST00000527464 UBA1P22314 1058 aaKnown RBP19.34■□□□□ 0.69
NR1H3-229ENST00000527464 PSMC6P62333 389 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 CCT2P78371 535 aaKnown RBP19.34■□□□□ 0.69
NR1H3-229ENST00000527464 PTPN11Q06124 597 aaPredicted RBP19.34■□□□□ 0.69
NR1H3-229ENST00000527464 AP3B2Q13367 1082 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 NEDD9Q14511 834 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 PKN1Q16512 942 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 NFRKBQ6P4R8 1299 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 CPLX2Q6PUV4 134 aaKnown RBP19.34■□□□□ 0.69
NR1H3-229ENST00000527464 GPRASP2Q96D09 838 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 CDHR1Q96JP9 859 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 SENP7Q9BQF6 1050 aa19.34■□□□□ 0.69
NR1H3-229ENST00000527464 CPLX1O14810 134 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 MAFGO15525 162 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 PPFIA4O75335 1185 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 TIMP1P01033 207 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 SUPT20HL2P0C7V6 817 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 SP2Q02086 613 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 TRIM22Q8IYM9 498 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 TDHQ8IZJ6 230 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 GIMAP8Q8ND71 665 aaPredicted RBP19.33■□□□□ 0.68
NR1H3-229ENST00000527464 BADQ92934 168 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 PHKBQ93100 1093 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 ZMYND12Q9H0C1 365 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 MLXIPQ9HAP2 919 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 NCOA5Q9HCD5 579 aaKnown RBP19.33■□□□□ 0.68
NR1H3-229ENST00000527464 RTEL1Q9NZ71 1219 aa19.33■□□□□ 0.68
NR1H3-229ENST00000527464 GNA11P29992 359 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 CLK2P49760 499 aaKnown RBP19.32■□□□□ 0.68
NR1H3-229ENST00000527464 SEMA3FQ13275 785 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 NBPF20Q3BBV1 942 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 METTL7BQ6UX53 244 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 CCDC148Q8NFR7 591 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 ZFP91Q96JP5 570 aaPredicted RBP19.32■□□□□ 0.68
NR1H3-229ENST00000527464 SPATA33Q96N06 139 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 KATNAL1Q9BW62 490 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 SLC26A6Q9BXS9 759 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 C6orf50Q9HD87 102 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 SH3GLB2Q9NR46 395 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 UBIAD1Q9Y5Z9 338 aa19.32■□□□□ 0.68
NR1H3-229ENST00000527464 SEC24BO95487 1268 aa19.31■□□□□ 0.68
NR1H3-229ENST00000527464 ITGB8P26012 769 aa19.31■□□□□ 0.68
NR1H3-229ENST00000527464 FXR1P51114 621 aaKnown RBP eCLIP19.31■□□□□ 0.68
NR1H3-229ENST00000527464 SSRP1Q08945 709 aaKnown RBP19.31■□□□□ 0.68
NR1H3-229ENST00000527464 SESTD1Q86VW0 696 aa19.31■□□□□ 0.68
NR1H3-229ENST00000527464 FAM177A1Q8N128 213 aaPredicted RBP19.31■□□□□ 0.68
NR1H3-229ENST00000527464 BICD2Q8TD16 824 aa19.31■□□□□ 0.68
NR1H3-229ENST00000527464 ANO3Q9BYT9 981 aa19.31■□□□□ 0.68
NR1H3-229ENST00000527464 B4GALT4O60513 344 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 SREBF1P36956 1147 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 HSDL1Q3SXM5 330 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 LRIT3Q3SXY7 679 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 MFSD5Q6N075 450 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 KAT2BQ92831 832 aa19.3■□□□□ 0.68
NR1H3-229ENST00000527464 SLKQ9H2G2 1235 aaPredicted RBP19.3■□□□□ 0.68
NR1H3-229ENST00000527464 PFKFB2O60825 505 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 CDKL5O76039 1030 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 DEXIO95424 95 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 F2P00734 622 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 ITGB5P18084 799 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 FPGSQ05932 587 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 C8orf34Q49A92 452 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 REXO1Q8N1G1 1221 aaKnown RBP19.29■□□□□ 0.68
NR1H3-229ENST00000527464 LARP6Q9BRS8 491 aaKnown RBP19.29■□□□□ 0.68
NR1H3-229ENST00000527464 TRPV6Q9H1D0 765 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 JADE2Q9NQC1 790 aa19.29■□□□□ 0.68
NR1H3-229ENST00000527464 HAS3O00219 553 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 NOP56O00567 594 aaKnown RBP19.28■□□□□ 0.68
NR1H3-229ENST00000527464 AK2P54819 239 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 STK3Q13188 491 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 MTMR1Q13613 665 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 FAM47CQ5HY64 1035 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 CYFIP1Q7L576 1253 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 TMEM199Q8N511 208 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 MXRA8Q9BRK3 442 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 HIPK3Q9H422 1215 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 TPCN1Q9ULQ1 816 aa19.28■□□□□ 0.68
NR1H3-229ENST00000527464 KCNA2P16389 499 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 PSEN2P49810 448 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 NEK4P51957 841 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 SCRN1Q12765 414 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 PPIGQ13427 754 aaKnown RBP eCLIP19.27■□□□□ 0.686e-8■■□□□ 11.5
NR1H3-229ENST00000527464 MFSD10Q14728 455 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 CEP55Q53EZ4 464 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 NIPA1Q7RTP0 329 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 NOC4LQ9BVI4 516 aaKnown RBP19.27■□□□□ 0.68
NR1H3-229ENST00000527464 TRMT13Q9NUP7 481 aaKnown RBP19.27■□□□□ 0.68
NR1H3-229ENST00000527464 TMEM260Q9NX78 707 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 PCDH10Q9P2E7 1040 aa19.27■□□□□ 0.68
NR1H3-229ENST00000527464 LAMA3Q16787 3333 aa19.27■□□□□ 0.67
NR1H3-229ENST00000527464 DOCK5Q9H7D0 1870 aa19.26■□□□□ 0.67
NR1H3-229ENST00000527464 CYP3A4P08684 503 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms