RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 MCTP2Q6DN12 878 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 NFRKBQ6P4R8 1299 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
SYVN1-208ENST00000527142 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-208ENST00000527142 TRIM43Q96BQ3 446 aaPredicted RBP12.34□□□□□ -0.43
SYVN1-208ENST00000527142 GPRASP2Q96D09 838 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 UBE2OQ9C0C9 1292 aaKnown RBP12.34□□□□□ -0.43
SYVN1-208ENST00000527142 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 LTBP2Q14767 1821 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 GRIN2DO15399 1336 aa12.34□□□□□ -0.43
SYVN1-208ENST00000527142 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 SCN10AQ9Y5Y9 1956 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 SPATA31C2B4DYI2 1134 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 CPLX1O14810 134 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 GGPS1O95749 300 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 CD4P01730 458 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-208ENST00000527142 PTPN11Q06124 597 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-208ENST00000527142 NEDD9Q14511 834 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 CPLX2Q6PUV4 134 aaKnown RBP12.33□□□□□ -0.44
SYVN1-208ENST00000527142 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 SH3RF1Q7Z6J0 888 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 NLRX1Q86UT6 975 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 TDHQ8IZJ6 230 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 GIMAP8Q8ND71 665 aaPredicted RBP12.33□□□□□ -0.44
SYVN1-208ENST00000527142 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 PHKBQ93100 1093 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 SENP7Q9BQF6 1050 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 ZMYND12Q9H0C1 365 aa12.33□□□□□ -0.44
SYVN1-208ENST00000527142 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
SYVN1-208ENST00000527142 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 CDKL5O76039 1030 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 F2P00734 622 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 RAG1P15918 1043 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 SREBF1P36956 1147 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 PSMC6P62333 389 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
SYVN1-208ENST00000527142 PKN1Q16512 942 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 REXO1Q8N1G1 1221 aaKnown RBP12.32□□□□□ -0.44
SYVN1-208ENST00000527142 BICD2Q8TD16 824 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 SPATA33Q96N06 139 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 KATNAL1Q9BW62 490 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 SLC26A6Q9BXS9 759 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 SH3GLB2Q9NR46 395 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
SYVN1-208ENST00000527142 PPFIA4O75335 1185 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 TIMP1P01033 207 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 GNA11P29992 359 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
SYVN1-208ENST00000527142 SP2Q02086 613 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 SEMA3FQ13275 785 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 NBPF20Q3BBV1 942 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 C8orf34Q49A92 452 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 BADQ92934 168 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 MLXIPQ9HAP2 919 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 UBIAD1Q9Y5Z9 338 aa12.31□□□□□ -0.44
SYVN1-208ENST00000527142 NOP56O00567 594 aaKnown RBP12.3□□□□□ -0.44
SYVN1-208ENST00000527142 MAFGO15525 162 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 B4GALT4O60513 344 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 PFKFB2O60825 505 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 DEXIO95424 95 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 SEC24BO95487 1268 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 ITGB5P18084 799 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 ITGB8P26012 769 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 FPGSQ05932 587 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
SYVN1-208ENST00000527142 MTMR1Q13613 665 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 LRIT3Q3SXY7 679 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 FAM47CQ5HY64 1035 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 KAT2BQ92831 832 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 NOC4LQ9BVI4 516 aaKnown RBP12.3□□□□□ -0.44
SYVN1-208ENST00000527142 TRPV6Q9H1D0 765 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 SLKQ9H2G2 1235 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-208ENST00000527142 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 STK36Q9NRP7 1315 aa12.3□□□□□ -0.44
SYVN1-208ENST00000527142 ZNF286BP0CG31 522 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 KCNA2P16389 499 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 AK2P54819 239 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 ARHGAP4P98171 946 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.441e-6■■□□□ 12.8
SYVN1-208ENST00000527142 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 MFSD5Q6N075 450 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 CYFIP1Q7L576 1253 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 CRYGNQ8WXF5 182 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
SYVN1-208ENST00000527142 JADE2Q9NQC1 790 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
SYVN1-208ENST00000527142 HAS3O00219 553 aa12.28□□□□□ -0.44
SYVN1-208ENST00000527142 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
SYVN1-208ENST00000527142 LGALS2P05162 132 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms