RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 MMP3P08254 477 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 UBA1P22314 1058 aaKnown RBP16.47■□□□□ 0.23
NXF1-204ENST00000527064 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
NXF1-204ENST00000527064 PURAQ00577 322 aaKnown RBP16.47■□□□□ 0.23
NXF1-204ENST00000527064 NEDD9Q14511 834 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 CELF3Q5SZQ8 465 aaKnown RBP16.47■□□□□ 0.23
NXF1-204ENST00000527064 IL27Q8NEV9 243 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 AFG1LQ8WV93 481 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 GPRASP2Q96D09 838 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 RTEL1Q9NZ71 1219 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 SPATA31C2B4DYI2 1134 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 TLR3O15455 904 aaKnown RBP16.46■□□□□ 0.23
NXF1-204ENST00000527064 GGPS1O95749 300 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 CLTBP09497 229 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 SYN1P17600 705 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 XBP1P17861 261 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 TLE2Q04725 743 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 DGKDQ16760 1214 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 GIMAP8Q8ND71 665 aaPredicted RBP16.46■□□□□ 0.23
NXF1-204ENST00000527064 WASF1Q92558 559 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 GTF3C6Q969F1 213 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 MLXIPQ9HAP2 919 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
NXF1-204ENST00000527064 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
NXF1-204ENST00000527064 MAFGO15525 162 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 SREBF1P36956 1147 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 NLRP5P59047 1200 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 MTMR1Q13613 665 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 ME3Q16798 604 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 MYSM1Q5VVJ2 828 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 METTL7BQ6UX53 244 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 ZFP91Q96JP5 570 aaPredicted RBP16.45■□□□□ 0.22
NXF1-204ENST00000527064 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 SENP7Q9BQF6 1050 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 TMEM260Q9NX78 707 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 LIMCH1Q9UPQ0 1083 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 UBIAD1Q9Y5Z9 338 aa16.45■□□□□ 0.22
NXF1-204ENST00000527064 NOP56O00567 594 aaKnown RBP16.44■□□□□ 0.22
NXF1-204ENST00000527064 CDK7P50613 346 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 SP2Q02086 613 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 RABEP1Q15276 862 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 JAKMIP3Q5VZ66 844 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 GALNT17Q6IS24 598 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 PGBD1Q96JS3 809 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 LBHD1Q9BQE6 289 aaPredicted RBP16.44■□□□□ 0.22
NXF1-204ENST00000527064 JADE2Q9NQC1 790 aa16.44■□□□□ 0.22
NXF1-204ENST00000527064 HOXD8P13378 290 aaPredicted RBP16.43■□□□□ 0.22
NXF1-204ENST00000527064 ITGB5P18084 799 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 ZNF76P36508 570 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 PSMC6P62333 389 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 NFRKBQ6P4R8 1299 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 FAM126BQ8IXS8 530 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 NECAB1Q8N987 351 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 KIF2CQ99661 725 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 MXRA8Q9BRK3 442 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 TMEM39AQ9NV64 488 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
NXF1-204ENST00000527064 ST18O60284 1047 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 PPFIA4O75335 1185 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 LARGE1O95461 756 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 MAGEA10P43363 369 aaPredicted RBP16.42■□□□□ 0.22
NXF1-204ENST00000527064 PTPN11Q06124 597 aaPredicted RBP16.42■□□□□ 0.22
NXF1-204ENST00000527064 FAAP100Q0VG06 881 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 CYFIP1Q7L576 1253 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 NIPA1Q7RTP0 329 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 DAGLBQ8NCG7 672 aa16.42■□□□□ 0.22
NXF1-204ENST00000527064 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
NXF1-204ENST00000527064 SH2B1Q9NRF2 756 aaPredicted RBP16.42■□□□□ 0.22
NXF1-204ENST00000527064 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
NXF1-204ENST00000527064 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 SORBS3O60504 671 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 F2P00734 622 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 CYP3A4P08684 503 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 SETQ01105 290 aaPredicted RBP16.41■□□□□ 0.22
NXF1-204ENST00000527064 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 HSDL1Q3SXM5 330 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 FAM47CQ5HY64 1035 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
NXF1-204ENST00000527064 SCN10AQ9Y5Y9 1956 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 LTBP2Q14767 1821 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 A0A1W2PPC1 479 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 TRIM43BA6NCK2 446 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 CD4P01730 458 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 SUPT20HL2P0C7V6 817 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 ZNF286BP0CG31 522 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 RAG1P15918 1043 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 KCNA2P16389 499 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 BMP8BP34820 402 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
NXF1-204ENST00000527064 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
NXF1-204ENST00000527064 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms