RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PRR16Q569H4 304 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 CCDC62Q6P9F0 684 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 PLA2G4DQ86XP0 818 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 PDGFCQ9NRA1 345 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.75■□□□□ 0.59
CAPN1-205ENST00000526954 KCNH7Q9NS40 1196 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 ZHX1Q9UKY1 873 aaPredicted RBP18.75■□□□□ 0.59
CAPN1-205ENST00000526954 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
CAPN1-205ENST00000526954 ARP10275 920 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 ATP2B1P20020 1258 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 TTLL4Q14679 1199 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 FAM173BQ6P4H8 233 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 SH3TC2Q8TF17 1288 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 SENP7Q9BQF6 1050 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 KCNMB3Q9NPA1 279 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
CAPN1-205ENST00000526954 ATP6V1DQ9Y5K8 247 aa18.74■□□□□ 0.59
CAPN1-205ENST00000526954 TBX3O15119 743 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 SEPT4O43236 478 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 SLC37A4O43826 429 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 NEMFO60524 1076 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 MCM7P33993 719 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 ADCYAP1R1P41586 468 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 NBR1Q14596 966 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 ZNF174Q15697 407 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 ETNPPLQ8TBG4 499 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 ARMC5Q96C12 935 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 AGO4Q9HCK5 861 aaKnown RBP18.73■□□□□ 0.59
CAPN1-205ENST00000526954 FAM184BQ9ULE4 1060 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
CAPN1-205ENST00000526954 NKRFO15226 690 aaKnown RBP eCLIP18.72■□□□□ 0.59
CAPN1-205ENST00000526954 MSH4O15457 936 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 ARIH2O95376 493 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 TXNP10599 105 aaKnown RBP18.72■□□□□ 0.59
CAPN1-205ENST00000526954 AKR1A1P14550 325 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 DUSP28Q4G0W2 176 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 C4orf32Q8N8J7 132 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 FAM20AQ96MK3 541 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 ZNF396Q96N95 335 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-205ENST00000526954 MTMR9Q96QG7 549 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
CAPN1-205ENST00000526954 TCHHQ07283 1943 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 NFASCO94856 1347 aa18.72■□□□□ 0.59
CAPN1-205ENST00000526954 DOCK5Q9H7D0 1870 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-205ENST00000526954 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
CAPN1-205ENST00000526954 LAD1O00515 517 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 ATP9AO75110 1047 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 BMP15O95972 392 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 KCNA2P16389 499 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 SMPD1P17405 629 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 CCND3P30281 292 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-205ENST00000526954 SP2Q02086 613 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 TNFAIP2Q03169 654 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 NEDD9Q14511 834 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 GIMAP8Q8ND71 665 aaPredicted RBP18.71■□□□□ 0.59
CAPN1-205ENST00000526954 SLC5A5Q92911 643 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 ZNF577Q9BSK1 485 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
CAPN1-205ENST00000526954 Q9Y3F1 56 aa18.71■□□□□ 0.59
CAPN1-205ENST00000526954 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
CAPN1-205ENST00000526954 ADCY6O43306 1168 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 UBA1P22314 1058 aaKnown RBP18.7■□□□□ 0.58
CAPN1-205ENST00000526954 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
CAPN1-205ENST00000526954 SLFN12Q8IYM2 578 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 HAS1Q92839 578 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 USP28Q96RU2 1077 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 RIT2Q99578 217 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 MCOLN1Q9GZU1 580 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 TMEM60Q9H2L4 133 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 TBC1D22BQ9NU19 505 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 CLIC4Q9Y696 253 aa18.7■□□□□ 0.58
CAPN1-205ENST00000526954 MORC2Q9Y6X9 1032 aaPredicted RBP18.7■□□□□ 0.58
CAPN1-205ENST00000526954 MSCO60682 206 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 DUSP11O75319 330 aaKnown RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 PSMD10O75832 226 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 BAG4O95429 457 aaKnown RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 CNGA1P29973 690 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 NASPP49321 788 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 ATP2C1P98194 919 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 PTGDRQ13258 359 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 ITGB3BPQ13352 177 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 PTPAQ15257 358 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 CALCRLQ16602 461 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 CELF3Q5SZQ8 465 aaKnown RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 TMEM63BQ5T3F8 832 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 EMID1Q96A84 441 aaPredicted RBP18.69■□□□□ 0.58
CAPN1-205ENST00000526954 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 FRMPD3Q5JV73 1810 aa18.69■□□□□ 0.58
CAPN1-205ENST00000526954 GH1P01241 217 aa18.68■□□□□ 0.58
CAPN1-205ENST00000526954 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
CAPN1-205ENST00000526954 PRPHP41219 470 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms