RNA–Protein interactions for RNA: ENST00000526938.5

CTNND1-215, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-215ENST00000526938 RHOXF2BP0C7M4 288 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 SPDYE6P0CI01 402 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 EEF1GP26641 437 aaKnown RBP9.58□□□□□ -0.88
CTNND1-215ENST00000526938 DGKZQ13574 1117 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 APTXQ7Z2E3 356 aaKnown RBP9.58□□□□□ -0.88
CTNND1-215ENST00000526938 SIAH1Q8IUQ4 282 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 RTKN2Q8IZC4 609 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 C7orf25Q9BPX7 421 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 RHOXF2Q9BQY4 288 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 LRRC27Q9C0I9 530 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 SEMA6BQ9H3T3 888 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 FZD1Q9UP38 647 aa9.58□□□□□ -0.88
CTNND1-215ENST00000526938 CTAGE9A4FU28 777 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 PSMC6P62333 389 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 ERVK-24P63145 666 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 COASYQ13057 564 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 HAUS3Q68CZ6 603 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 NSMFQ6X4W1 530 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 TMEM139Q8IV31 216 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 RDH13Q8NBN7 331 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 DUSP9Q99956 384 aaKnown RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 NT5C3AQ9H0P0 336 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 GOPCQ9HD26 462 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 ARGLU1Q9NWB6 273 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 GCOM1H8Y6P7 765 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 CLIC2O15247 247 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 MED24O75448 989 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 PRPF6O94906 941 aaKnown RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 POLR2MP0CAP2 368 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 FBXO38Q6PIJ6 1188 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 TRIM65Q6PJ69 517 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 SAMD7Q7Z3H4 446 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 KRT26Q7Z3Y9 468 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 EHD4Q9H223 541 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 THAP9Q9H5L6 903 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 JADE2Q9NQC1 790 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■■■■ 38.5
CTNND1-215ENST00000526938 PCDHB13Q9Y5F0 798 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 GCNT3O95395 438 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 MYL1P05976 194 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 GCFC2P16383 781 aaKnown RBP9.57□□□□□ -0.88
CTNND1-215ENST00000526938 MATR3P43243 847 aaKnown RBP eCLIP9.57□□□□□ -0.881e-6■■■■■ 28.6
CTNND1-215ENST00000526938 FXR2P51116 673 aaKnown RBP eCLIP9.57□□□□□ -0.882e-8■■■□□ 16.9
CTNND1-215ENST00000526938 CXCL9Q07325 125 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 ADAM9Q13443 819 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 PDIA5Q14554 519 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 RASA3Q14644 834 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 TEX2Q8IWB9 1127 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 CHURC1Q8WUH1 139 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 GLT8D2Q9H1C3 349 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 NDST4Q9H3R1 872 aa9.57□□□□□ -0.88
CTNND1-215ENST00000526938 FAM86B1E9PN63 330 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 MEIS2O14770 477 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CTIFO43310 598 aaKnown RBP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 GAS7O60861 476 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 ENTPD3O75355 529 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 FAM86B2P0C5J1 330 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CYLC1P35663 651 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CIAPIN1Q6FI81 312 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 PPP4R3AQ6IN85 833 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 TMCO3Q6UWJ1 677 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 MYCT1Q8N699 235 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 NEK11Q8NG66 645 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 MAGEF1Q9HAY2 307 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 KCNG1Q9UIX4 513 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CCPG1Q9ULG6 757 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 TIAM2Q8IVF5 1701 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 ZBTB39O15060 712 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 FLOT1O75955 427 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 FAM13AO94988 1023 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 NDUFA10O95299 355 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 LRCH2Q5VUJ6 765 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CATSPER3Q86XQ3 398 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 NAA15Q9BXJ9 866 aaKnown RBP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 PIM2Q9P1W9 311 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 CHD4Q14839 1912 aa9.56□□□□□ -0.88
CTNND1-215ENST00000526938 COL5A3P25940 1745 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-215ENST00000526938 TRIM14Q14142 442 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 AGBL1Q96MI9 1066 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 FGFBP2Q9BYJ0 223 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 ZNRF3Q9ULT6 936 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 DOCK2Q92608 1830 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 MYH6P13533 1939 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 SEC31AO94979 1220 aaKnown RBP9.55□□□□□ -0.88
CTNND1-215ENST00000526938 PLEKP08567 350 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-215ENST00000526938 POLD1P28340 1107 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 APBA1Q02410 837 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 RAPGEF1Q13905 1077 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 PTPROQ16827 1216 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 KIAA1755Q5JYT7 1200 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 FAM151AQ8WW52 585 aa9.55□□□□□ -0.88
CTNND1-215ENST00000526938 CCDC51Q96ER9 411 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms