RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 SPATA31C2B4DYI2 1134 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 STXBP3O00186 592 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 STAM2O75886 525 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 CYP2C9P11712 490 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 CSF2RAP15509 400 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 ICAM3P32942 547 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 TOB2Q14106 344 aaPredicted RBP19.53■□□□□ 0.72
CCS-203ENST00000526058 HSDL1Q3SXM5 330 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 GNPTABQ3T906 1256 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 NFRKBQ6P4R8 1299 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 C16orf59Q7L2K0 433 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 NOC4LQ9BVI4 516 aaKnown RBP19.53■□□□□ 0.72
CCS-203ENST00000526058 UPF3BQ9BZI7 483 aaKnown RBP19.53■□□□□ 0.72
CCS-203ENST00000526058 PCDHA6Q9UN73 950 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 PCDHA8Q9Y5H6 950 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 CYP46A1Q9Y6A2 500 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 NID2Q14112 1375 aa19.53■□□□□ 0.72
CCS-203ENST00000526058 CCDC196A0A1B0GTZ2 297 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 SPDYE3A6NKU9 549 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 PPFIA3O75145 1194 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 ZNF286BP0CG31 522 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 PDIA3P30101 505 aaKnown RBP19.52■□□□□ 0.72
CCS-203ENST00000526058 EVCP57679 992 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 XRRA1Q6P2D8 792 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 TM6SF1Q9BZW5 370 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 MLXIPQ9HAP2 919 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 RIC8AQ9NPQ8 531 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 BARHL2Q9NY43 387 aa19.52■□□□□ 0.72
CCS-203ENST00000526058 SMCO2A6NFE2 343 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 FIBPO43427 364 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 HOXD8P13378 290 aaPredicted RBP19.51■□□□□ 0.71
CCS-203ENST00000526058 CCL23P55773 120 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
CCS-203ENST00000526058 NTRK3Q16288 839 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 PFKFB3Q16875 520 aaPredicted RBP19.51■□□□□ 0.71
CCS-203ENST00000526058 PPP1R18Q6NYC8 613 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 TMEM199Q8N511 208 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 PHKBQ93100 1093 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 PGBD1Q96JS3 809 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.713e-7■□□□□ 11.1
CCS-203ENST00000526058 LARP6Q9BRS8 491 aaKnown RBP19.51■□□□□ 0.71
CCS-203ENST00000526058 WNT8AQ9H1J5 351 aa19.51■□□□□ 0.71
CCS-203ENST00000526058 NCOA5Q9HCD5 579 aaKnown RBP19.51■□□□□ 0.71
CCS-203ENST00000526058 TRIP12Q14669 1992 aaPredicted RBP19.5■□□□□ 0.71
CCS-203ENST00000526058 hCG_1984214I3L0E3 225 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 PPFIA4O75335 1185 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 SUPT20HL2P0C7V6 817 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 ACRP10323 421 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 PSEN2P49810 448 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 PTPN11Q06124 597 aaPredicted RBP19.5■□□□□ 0.71
CCS-203ENST00000526058 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.712e-6■■□□□ 12.1
CCS-203ENST00000526058 PKN1Q16512 942 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 CYFIP1Q7L576 1253 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 ZNF713Q8N859 430 aaPredicted RBP19.5■□□□□ 0.71
CCS-203ENST00000526058 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 TELO2Q9Y4R8 837 aa19.5■□□□□ 0.71
CCS-203ENST00000526058 PRPF3O43395 683 aaKnown RBP19.49■□□□□ 0.71
CCS-203ENST00000526058 F2P00734 622 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 SCG2P13521 617 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 ITGB5P18084 799 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 ADCY7P51828 1080 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 NEDD9Q14511 834 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 GDF6Q6KF10 455 aaPredicted RBP19.49■□□□□ 0.71
CCS-203ENST00000526058 NLRX1Q86UT6 975 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 RNPC3Q96LT9 517 aaKnown RBP19.49■□□□□ 0.71
CCS-203ENST00000526058 TMEM260Q9NX78 707 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 SCN5AQ14524 2016 aa19.49■□□□□ 0.71
CCS-203ENST00000526058 HAS3O00219 553 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 ADAMTS3O15072 1205 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 ATP9AO75110 1047 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 MFSD10Q14728 455 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 PTGISQ16647 500 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 KIAA0753Q2KHM9 967 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 TMEM240Q5SV17 173 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 GPR153Q6NV75 609 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 METTL7BQ6UX53 244 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 Q7L0L9 218 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 SESTD1Q86VW0 696 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 GPRASP2Q96D09 838 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 SCLYQ96I15 445 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 CTAGE1Q96RT6 745 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 C16orf70Q9BSU1 422 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 PDRG1Q9NUG6 133 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 HDAC6Q9UBN7 1215 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
CCS-203ENST00000526058 CLK2P49760 499 aaKnown RBP19.47■□□□□ 0.71
CCS-203ENST00000526058 ZNF365Q70YC5 407 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 C7orf31Q8N865 590 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 GPR20Q99678 358 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 SENP7Q9BQF6 1050 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 KATNAL1Q9BW62 490 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 SLC26A6Q9BXS9 759 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 ANO3Q9BYT9 981 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 GTF2IRD1Q9UHL9 959 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 NOD1Q9Y239 953 aa19.47■□□□□ 0.71
CCS-203ENST00000526058 NOP56O00567 594 aaKnown RBP19.46■□□□□ 0.71
CCS-203ENST00000526058 FOSP01100 380 aaPredicted RBP19.46■□□□□ 0.71
CCS-203ENST00000526058 LGALS2P05162 132 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms