RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TRIM71Q2Q1W2 868 aaKnown RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 HSDL1Q3SXM5 330 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 UTP14CQ5TAP6 766 aaKnown RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 TRAF7Q6Q0C0 670 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 ALYREFQ86V81 257 aaKnown RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 IQCA1Q86XH1 822 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 GJD3Q8N144 294 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 ENAHQ8N8S7 591 aaPredicted RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 FBXO22Q8NEZ5 403 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 ATP6V0A1Q93050 837 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 IWS1Q96ST2 819 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 UBE2ZQ9H832 354 aaPredicted RBP7.66□□□□□ -1.18
CD44-221ENST00000526000 MLXIPQ9HAP2 919 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 C11orf16Q9NQ32 467 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 DIAPH3Q9NSV4 1193 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 SETD4Q9NVD3 440 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 PNMA2Q9UL42 364 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 TELO2Q9Y4R8 837 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 PCDHA1Q9Y5I3 950 aa7.66□□□□□ -1.18
CD44-221ENST00000526000 C17orf102A2RUQ5 167 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 KLRF2D3W0D1 207 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 HAS3O00219 553 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 OPLAHO14841 1288 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 TREHO43280 583 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 IGHDP01880 384 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 CXCL10P02778 98 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 IBSPP21815 317 aaPredicted RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 CACNB1Q02641 598 aaPredicted RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 GPM6BQ13491 265 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 TRIP12Q14669 1992 aaPredicted RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 CLUL1Q15846 466 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 ASPRV1Q53RT3 343 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 CELF3Q5SZQ8 465 aaKnown RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 IFIT1BQ5T764 474 aaKnown RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 MYSM1Q5VVJ2 828 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 ERICH6BQ5W0A0 696 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 PTCRAQ6ISU1 281 aaPredicted RBP7.65□□□□□ -1.18
CD44-221ENST00000526000 CYB5R4Q7L1T6 521 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 SESTD1Q86VW0 696 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 PLEKHM2Q8IWE5 1019 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 GBF1Q92538 1859 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 PIGSQ96S52 555 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 PDCD2LQ9BRP1 358 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 UBAC1Q9BSL1 405 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 AMNQ9BXJ7 453 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 RNPEPQ9H4A4 650 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
CD44-221ENST00000526000 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.64□□□□□ -1.19
CD44-221ENST00000526000 PI4K2BG5E9Z4 385 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 GCOM1H8Y6P7 765 aaPredicted RBP7.64□□□□□ -1.19
CD44-221ENST00000526000 PPFIA4O75335 1185 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 AMHP03971 560 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 NEFLP07196 543 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 POLR2MP0CAP2 368 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 SMIM10L2AP0DMW4 78 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 SMIM10L2BP0DMW5 78 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 MFAP1P55081 439 aaKnown RBP7.64□□□□□ -1.19
CD44-221ENST00000526000 PGM5Q15124 567 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 IMMTQ16891 758 aaKnown RBP7.64□□□□□ -1.19
CD44-221ENST00000526000 SLC35G1Q2M3R5 365 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 EPC2Q52LR7 807 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 CCDC178Q5BJE1 867 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 TCEAL5Q5H9L2 206 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 CYFIP1Q7L576 1253 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 VSIG10LQ86VR7 867 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 TRIM50Q86XT4 487 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 FAM178BQ8IXR5 827 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 PPTC7Q8NI37 304 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 ANKS1AQ92625 1134 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 YME1L1Q96TA2 773 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 C16orf70Q9BSU1 422 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 KATNAL1Q9BW62 490 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 IGFLR1Q9H665 355 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 HCN4Q9Y3Q4 1203 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 INSL6Q9Y581 213 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 CDH23Q9H251 3354 aa7.64□□□□□ -1.19
CD44-221ENST00000526000 SCN10AQ9Y5Y9 1956 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 LCTP09848 1927 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 H3BRB1 525 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 NOP56O00567 594 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 IFIT3O14879 490 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 GPR37L1O60883 481 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 F2P00734 622 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 PCP11498 1178 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 UBA1P22314 1058 aaKnown RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 CCND2P30279 289 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 HOXD11P31277 338 aaPredicted RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 HSD17B4P51659 736 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 ARHGAP4P98171 946 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 HDAC1Q13547 482 aaPredicted RBP7.63□□□□□ -1.19
CD44-221ENST00000526000 LEXMQ3ZCV2 418 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 CHD1LQ86WJ1 897 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 BANK1Q8NDB2 785 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 SEPT8Q92599 483 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 ZBTB10Q96DT7 871 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 KRT23Q9C075 422 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 IL25Q9H293 177 aa7.63□□□□□ -1.19
CD44-221ENST00000526000 RWDD1Q9H446 243 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms