RNA–Protein interactions for RNA: ENST00000525964.6

NCAPD3-203, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 1 (best)

Gene NCAPD3, Length 5,025 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-203ENST00000525964 DPH5Q9H2P9 285 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 MAD1L1Q9Y6D9 718 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 ZNF658Q5TYW1 1059 aaPredicted RBP15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 FAM71BQ8TC56 605 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 PGBD1Q96JS3 809 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 IKBKBO14920 756 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 MAP3K21Q5TCX8 1036 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 KAZNQ674X7 775 aa15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 MRPL47Q9HD33 250 aaKnown RBP15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 CPSF3Q9UKF6 684 aaKnown RBP15.75■□□□□ 0.11
NCAPD3-203ENST00000525964 WDR46O15213 610 aaKnown RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 TSNAXIP1Q2TAA8 658 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ANKRD13CQ8N6S4 541 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ZNF653Q96CK0 615 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 PLEKHA4Q9H4M7 779 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ATP8B3O60423 1300 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 KDM5CP41229 1560 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 CASQ2O14958 399 aaPredicted RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 KRT10P13645 584 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 EIF2AK2P19525 551 aaKnown RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 MXI1P50539 228 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 EHHADHQ08426 723 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ZNF341Q9BYN7 854 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 EMILIN3Q9NT22 766 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 KLHL14Q9P2G3 628 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 NR5A1Q13285 461 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ELMSAN1Q6PJG2 1045 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 ARMCX2Q7L311 632 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 PNMA8AQ86V59 439 aaPredicted RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 C2orf69Q8N8R5 385 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 SCYL1Q96KG9 808 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 RCOR1Q9UKL0 485 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 MAPK4P31152 587 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 AP3B2Q13367 1082 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 PHLDB2Q86SQ0 1253 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 LINC00301Q8NCQ3 95 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 MGARPQ8TDB4 240 aa15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
NCAPD3-203ENST00000525964 CASP14P31944 242 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 ARL4AP40617 200 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 SATB1Q01826 763 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 LRRC41Q15345 812 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 ARL6IP4Q66PJ3 421 aaKnown RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 ZNF526Q8TF50 670 aaPredicted RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 PTPROQ16827 1216 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 ZNF449Q6P9G9 518 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 RNF207Q6ZRF8 634 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 RFX6Q8HWS3 928 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 GDAP1L1Q96MZ0 367 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 SLC38A10Q9HBR0 1119 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 NXF1Q9UBU9 619 aaKnown RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 K7ERI5 159 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 GH2P01242 217 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 CCNE1P24864 410 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 RASSF7Q02833 373 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 SLFN12LQ6IEE8 588 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 ADAT2Q7Z6V5 191 aaKnown RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 LRRC8AQ8IWT6 810 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 MAGOHBQ96A72 148 aaKnown RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 SASH1O94885 1247 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 PLA2G4BP0C869 781 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 YWHAGP61981 247 aaKnown RBP eCLIP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 PI4K2BQ8TCG2 481 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 HOXC10Q9NYD6 342 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 CDK12Q9NYV4 1490 aaPredicted RBP15.73■□□□□ 0.11
NCAPD3-203ENST00000525964 CYP27B1O15528 508 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 SH2D4BQ5SQS7 431 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 SKA2Q8WVK7 121 aaPredicted RBP15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 STRBPQ96SI9 672 aaKnown RBP15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 SPATA31E1Q6ZUB1 1445 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 MEIS1O00470 390 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 TTBK2Q6IQ55 1244 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 EFCAB8A8MWE9 144 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 CLIC2O15247 247 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 PDE1BQ01064 536 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 RASSF4Q9H2L5 321 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 PCIF1Q9H4Z3 704 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 CYP2D7A0A087X1C5 515 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 APBA1Q02410 837 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 DNAJC24Q6P3W2 148 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 TTC1Q99614 292 aa15.72■□□□□ 0.11
NCAPD3-203ENST00000525964 ADGBQ8N7X0 1667 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 GOLGA8SH3BPF8 625 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 OAS2P29728 719 aaKnown RBP15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 ELF1P32519 619 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 CRKP46108 304 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 CAPN12Q6ZSI9 719 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 EFCAB13Q8IY85 973 aa15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 TDRD7Q8NHU6 1098 aaKnown RBP15.71■□□□□ 0.11
NCAPD3-203ENST00000525964 TCP11Q8WWU5 503 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms