RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 PPP1R13LQ8WUF5 828 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 ALDH8A1Q9H2A2 487 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 NCOA5Q9HCD5 579 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 RIC8AQ9NPQ8 531 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 PDRG1Q9NUG6 133 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 PCDHA6Q9UN73 950 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 PCDHA8Q9Y5H6 950 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 MYH7BA7E2Y1 1941 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 FIBPO43427 364 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 SCG2P13521 617 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 ADCY7P51828 1080 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 CCT2P78371 535 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 NTRK3Q16288 839 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 DGKDQ16760 1214 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 PHKBQ93100 1093 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 SPATA33Q96N06 139 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 LARP6Q9BRS8 491 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 PPP1R12CQ9BZL4 782 aa21.23■□□□□ 0.99
TSPAN4-215ENST00000525334 SMCO2A6NFE2 343 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 SPATA31C2B4DYI2 1134 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 PRPF3O43395 683 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 PPFIA3O75145 1194 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 ANAPC15P60006 121 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 FPGSQ05932 587 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 SHHQ15465 462 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 PKN1Q16512 942 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 HSDL1Q3SXM5 330 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 FAM47CQ5HY64 1035 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 TEX2Q8IWB9 1127 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 KAT2BQ92831 832 aa21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 TRMT13Q9NUP7 481 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-215ENST00000525334 HOXD8P13378 290 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 IFNAR1P17181 557 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 EPHB4P54760 987 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 CHMP4BP1P59074 171 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 C9orf50Q5SZB4 431 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 MFSD5Q6N075 450 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 NFRKBQ6P4R8 1299 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 NLRX1Q86UT6 975 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 RNF26Q9BY78 433 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 BCAS3Q9H6U6 928 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 MLXIPQ9HAP2 919 aa21.21■□□□□ 0.99
TSPAN4-215ENST00000525334 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 SEC24BO95487 1268 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 ZNF286BP0CG31 522 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 ITGB5P18084 799 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 AKAP17AQ02040 695 aaKnown RBP21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 ZNF274Q96GC6 653 aaPredicted RBP21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 PGBD1Q96JS3 809 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 SLC26A6Q9BXS9 759 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 HIPK3Q9H422 1215 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 EHMT1Q9H9B1 1298 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 TMEM260Q9NX78 707 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 UMODL1Q5DID0 1318 aa21.2■□□□□ 0.98
TSPAN4-215ENST00000525334 F2P00734 622 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 SUPT20HL2P0C7V6 817 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 CYP2C18P33260 490 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 CLK2P49760 499 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 PTPN11Q06124 597 aaPredicted RBP21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 NEDD9Q14511 834 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 GPRASP2Q96D09 838 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 NOC4LQ9BVI4 516 aaKnown RBP21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 ANO3Q9BYT9 981 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 GLT8D2Q9H1C3 349 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 UBIAD1Q9Y5Z9 338 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 DOCK5Q9H7D0 1870 aa21.19■□□□□ 0.98
TSPAN4-215ENST00000525334 ESYT2A0FGR8 921 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 PPFIA4O75335 1185 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 FOSP01100 380 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 CYP2C9P11712 490 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 PSEN2P49810 448 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 STK3Q13188 491 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 AP3B2Q13367 1082 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 METTL7BQ6UX53 244 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 CYFIP1Q7L576 1253 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 TMEM199Q8N511 208 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 CCDC12Q8WUD4 166 aaPredicted RBP21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 IL17RAQ96F46 866 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 KATNAL1Q9BW62 490 aa21.18■□□□□ 0.98
TSPAN4-215ENST00000525334 NOP56O00567 594 aaKnown RBP21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 CSF2RAP15509 400 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 MTMR1Q13613 665 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 MFSD10Q14728 455 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 SESTD1Q86VW0 696 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 CDHR1Q96JP9 859 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 SENP7Q9BQF6 1050 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 ZMYND12Q9H0C1 365 aa21.17■□□□□ 0.98
TSPAN4-215ENST00000525334 HAS3O00219 553 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 CPLX1O14810 134 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 ADAMTS3O15072 1205 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 PPIGQ13427 754 aaKnown RBP eCLIP21.16■□□□□ 0.983e-12■□□□□ 10.1
TSPAN4-215ENST00000525334 KIAA0753Q2KHM9 967 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 JAKMIP3Q5VZ66 844 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 WNT8AQ9H1J5 351 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 C6orf50Q9HD87 102 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 JADE2Q9NQC1 790 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 TELO2Q9Y4R8 837 aa21.16■□□□□ 0.98
TSPAN4-215ENST00000525334 ATP9AO75110 1047 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms