RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 ZC3H7AQ8IWR0 971 aaKnown RBP6.4□□□□□ -1.38
CD44-215ENST00000525241 PIP4K2CQ8TBX8 421 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 FBXW5Q969U6 566 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 ZNF652Q9Y2D9 606 aa6.4□□□□□ -1.38
CD44-215ENST00000525241 NKRFO15226 690 aaKnown RBP eCLIP6.39□□□□□ -1.39
CD44-215ENST00000525241 SMARCA5O60264 1052 aaPredicted RBP6.39□□□□□ -1.39
CD44-215ENST00000525241 PYGMP11217 842 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 GNAT1P11488 350 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 CDR1P51861 262 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 SPIRE1Q08AE8 756 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 CHRNA2Q15822 529 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 DALRD3Q5D0E6 543 aaKnown RBP6.39□□□□□ -1.39
CD44-215ENST00000525241 ZNF648Q5T619 568 aaPredicted RBP6.39□□□□□ -1.39
CD44-215ENST00000525241 TMEM132EQ6IEE7 984 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 ABHD17CQ6PCB6 329 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 C16orf59Q7L2K0 433 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 MILR1Q7Z6M3 343 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 KCNN1Q92952 543 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 NINJ1Q92982 152 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 SMOC1Q9H4F8 434 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 PCDHA5Q9Y5H7 936 aa6.39□□□□□ -1.39
CD44-215ENST00000525241 TCRBV5S4A2TA0A5A2 114 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 ETV2O00321 342 aaPredicted RBP6.38□□□□□ -1.39
CD44-215ENST00000525241 KRIT1O00522 736 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 ASLP04424 464 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 EPHB3P54753 998 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 DLG4P78352 724 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 CYP4F22Q6NT55 531 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 UHMK1Q8TAS1 419 aaKnown RBP6.38□□□□□ -1.39
CD44-215ENST00000525241 MZB1Q8WU39 189 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 ALG3Q92685 438 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 CBLCQ9ULV8 474 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 COQ6Q9Y2Z9 468 aa6.38□□□□□ -1.39
CD44-215ENST00000525241 TNPO3Q9Y5L0 923 aaKnown RBP6.38□□□□□ -1.39
CD44-215ENST00000525241 CADPSQ9ULU8 1353 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 TCRBV5S2A0A599 114 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 CCDC66A2RUB6 948 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 AMY2AP04746 511 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 ASGR2P07307 311 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 PDE6AP16499 860 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 AMY2BP19961 511 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 GLDCP23378 1020 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 PMLP29590 882 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 NCKAP1LP55160 1127 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 ZNF460Q14592 562 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 OSTM1Q86WC4 334 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 IGDCC3Q8IVU1 814 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 DHX37Q8IY37 1157 aaKnown RBP6.37□□□□□ -1.39
CD44-215ENST00000525241 PHOSPHO1Q8TCT1 267 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 CELF4Q9BZC1 486 aaKnown RBP6.37□□□□□ -1.39
CD44-215ENST00000525241 CATSPERZQ9NTU4 200 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 INTS7Q9NVH2 962 aaKnown RBP6.37□□□□□ -1.39
CD44-215ENST00000525241 MAGEC2Q9UBF1 373 aaPredicted RBP6.37□□□□□ -1.39
CD44-215ENST00000525241 MYOTQ9UBF9 498 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 DSEQ9UL01 958 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 PLAAQ9Y263 795 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 PCDHB4Q9Y5E5 795 aa6.37□□□□□ -1.39
CD44-215ENST00000525241 FAM83GA6ND36 823 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 SLC27A2O14975 620 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 N4BP3O15049 544 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 GSTA4O15217 222 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 OPA1O60313 960 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 MAFKO60675 156 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 APPP05067 770 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ATF2P15336 505 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 IGFBP6P24592 240 aaPredicted RBP6.36□□□□□ -1.39
CD44-215ENST00000525241 IGFALSP35858 605 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 DNM2P50570 870 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 GYS2P54840 703 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ST5P78524 1137 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 LACTBP83111 547 aaPredicted RBP6.36□□□□□ -1.39
CD44-215ENST00000525241 GPR19Q15760 415 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 FAM47CQ5HY64 1035 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 EGFLAMQ63HQ2 1017 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
CD44-215ENST00000525241 ARHGAP36Q6ZRI8 547 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 AMIGO3Q86WK7 504 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 MIB1Q86YT6 1006 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 RBM12BQ8IXT5 1001 aaKnown RBP6.36□□□□□ -1.39
CD44-215ENST00000525241 NIM1KQ8IY84 436 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 IGSF22Q8N9C0 903 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ARRDC4Q8NCT1 418 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 ASH2LQ9UBL3 628 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
CD44-215ENST00000525241 B4E1Z4 1266 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 IRS4O14654 1257 aaPredicted RBP6.35□□□□□ -1.39
CD44-215ENST00000525241 NPTXRO95502 500 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 TMEM253P0C7T8 217 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 C1QTNF9P0C862 333 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 NCAM1P13591 858 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 JAM2P57087 298 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 TARBP2Q15633 366 aaKnown RBP6.35□□□□□ -1.39
CD44-215ENST00000525241 CRY1Q16526 586 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 OVCH1Q7RTY7 1134 aa6.35□□□□□ -1.39
CD44-215ENST00000525241 BHLHE22Q8NFJ8 381 aaPredicted RBP6.35□□□□□ -1.39
CD44-215ENST00000525241 CLEC4DQ8WXI8 215 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms