RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ADCY3O60266 1144 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 STEAP3Q658P3 488 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 NSMFQ6X4W1 530 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 CARFQ8N187 725 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 LRRC47Q8N1G4 583 aaKnown RBP8.21□□□□□ -1.1
COPB1-203ENST00000525214 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 ADAM7Q9H2U9 754 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 EPB41L1Q9H4G0 881 aa8.21□□□□□ -1.1
COPB1-203ENST00000525214 RASGRF1Q13972 1273 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 NFIXQ14938 502 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 NBPF6Q5VWK0 638 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 STK32CQ86UX6 486 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 DCAF4Q8WV16 495 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 RELTQ969Z4 430 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 NBPF4Q96M43 638 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 SPATA9Q9BWV2 254 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 JAM3Q9BX67 310 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
COPB1-203ENST00000525214 DGKIO75912 1065 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 THBS2P35442 1172 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 ITGA1P56199 1179 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 SERINC3Q13530 473 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 CHRNA2Q15822 529 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 STYK1Q6J9G0 422 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 KYQ8NBH2 561 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 KRTAP4-9Q9BYQ8 210 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 CCDC113Q9H0I3 377 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 ASXL2Q76L83 1435 aa8.19□□□□□ -1.1
COPB1-203ENST00000525214 CCDC85CA6NKD9 419 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 U2SURPO15042 1029 aaKnown RBP8.18□□□□□ -1.1
COPB1-203ENST00000525214 GTF2F1P35269 517 aaKnown RBP eCLIP8.18□□□□□ -1.1
COPB1-203ENST00000525214 LBX2Q6XYB7 198 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 FRMD5Q7Z6J6 570 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 ZC3H18Q86VM9 953 aaKnown RBP8.18□□□□□ -1.1
COPB1-203ENST00000525214 PCDH18Q9HCL0 1135 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 NTMQ9P121 344 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 PFDN2Q9UHV9 154 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 NCANO14594 1321 aa8.18□□□□□ -1.1
COPB1-203ENST00000525214 B8ZZF3 427 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 PRRG2O14669 202 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 FOXD2O60548 495 aaPredicted RBP8.17□□□□□ -1.1
COPB1-203ENST00000525214 DIAPH1O60610 1272 aaKnown RBP8.17□□□□□ -1.1
COPB1-203ENST00000525214 SARSP49591 514 aaKnown RBP8.17□□□□□ -1.1
COPB1-203ENST00000525214 IFRD2Q12894 506 aaPredicted RBP8.17□□□□□ -1.1
COPB1-203ENST00000525214 ADAM9Q13443 819 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 MTERF2Q49AM1 385 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 PRR31Q5SQ13 230 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 NT5DC1Q5TFE4 455 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 FOXB2Q5VYV0 432 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 PIP4K2CQ8TBX8 421 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 TEPSINQ96N21 525 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 SLC6A20Q9NP91 592 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 DTLQ9NZJ0 730 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 SIRPGQ9P1W8 387 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 MYOTQ9UBF9 498 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 WASF3Q9UPY6 502 aa8.17□□□□□ -1.1
COPB1-203ENST00000525214 SMARCA5O60264 1052 aaPredicted RBP8.16□□□□□ -1.1
COPB1-203ENST00000525214 NOBOXO60393 691 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 LRG1P02750 347 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 RPL13P26373 211 aaKnown RBP8.16□□□□□ -1.1
COPB1-203ENST00000525214 RBL2Q08999 1139 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 RASA3Q14644 834 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 TEPPQ6URK8 271 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 TTLL7Q6ZT98 887 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 ZNF761Q86XN6 746 aaPredicted RBP8.16□□□□□ -1.1
COPB1-203ENST00000525214 CXorf38Q8TB03 319 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 ARMC5Q96C12 935 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 ZFYVE21Q9BQ24 234 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 SMOC1Q9H4F8 434 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 ASH2LQ9UBL3 628 aa8.16□□□□□ -1.1
COPB1-203ENST00000525214 PPP1R1BQ9UD71 204 aaPredicted RBP8.16□□□□□ -1.1
COPB1-203ENST00000525214 PRICKLE3O43900 615 aaPredicted RBP8.15□□□□□ -1.1
COPB1-203ENST00000525214 GRK2P25098 689 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 GRK3P35626 688 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 GPR85P60893 370 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 NKX3-2P78367 333 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 SSRP1Q08945 709 aaKnown RBP8.15□□□□□ -1.1
COPB1-203ENST00000525214 KIZQ2M2Z5 673 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 CYP4F22Q6NT55 531 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 OTOP3Q7RTS5 596 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 PHOSPHO1Q8TCT1 267 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 TOE1Q96GM8 510 aaKnown RBP8.15□□□□□ -1.1
COPB1-203ENST00000525214 YIPF4Q9BSR8 244 aa8.15□□□□□ -1.1
COPB1-203ENST00000525214 HIRIP3Q9BW71 556 aaPredicted RBP8.15□□□□□ -1.1
COPB1-203ENST00000525214 NGRNQ9NPE2 291 aaKnown RBP8.15□□□□□ -1.1
COPB1-203ENST00000525214 C6orf222P0C671 652 aaPredicted RBP8.14□□□□□ -1.11
COPB1-203ENST00000525214 HABP4Q5JVS0 413 aaKnown RBP8.14□□□□□ -1.11
COPB1-203ENST00000525214 FAM209AQ5JX71 171 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 IFNL3Q8IZI9 196 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 TTLL6Q8N841 843 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
COPB1-203ENST00000525214 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.14□□□□□ -1.11
COPB1-203ENST00000525214 ADAMTS17Q8TE56 1095 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 TRAF6Q9Y4K3 522 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 DUSP10Q9Y6W6 482 aa8.14□□□□□ -1.11
COPB1-203ENST00000525214 FAM221BA6H8Z2 402 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 KRIT1O00522 736 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 SLC27A2O14975 620 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 FAM153BP0C7A2 387 aa8.13□□□□□ -1.11
COPB1-203ENST00000525214 COL6A2P12110 1019 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms