RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 LARGE1O95461 756 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 CTDNEP1O95476 244 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 CYP3A4P08684 503 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
TTC39A-213ENST00000524442 CELF3Q5SZQ8 465 aaKnown RBP11.56□□□□□ -0.56
TTC39A-213ENST00000524442 PRPF38BQ5VTL8 546 aaKnown RBP11.56□□□□□ -0.56
TTC39A-213ENST00000524442 MYSM1Q5VVJ2 828 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 NECAB1Q8N987 351 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 DAGLBQ8NCG7 672 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 NSUN7Q8NE18 718 aaKnown RBP11.56□□□□□ -0.56
TTC39A-213ENST00000524442 PPTC7Q8NI37 304 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 COPS5Q92905 334 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 VTI1AQ96AJ9 217 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 TOX2Q96NM4 488 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 LLPHQ9BRT6 129 aaKnown RBP11.56□□□□□ -0.56
TTC39A-213ENST00000524442 JADE2Q9NQC1 790 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 RTEL1Q9NZ71 1219 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 PCDHA4Q9UN74 947 aa11.56□□□□□ -0.56
TTC39A-213ENST00000524442 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 TNRC18O15417 2968 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 PPFIA4O75335 1185 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 GGPS1O95749 300 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 ITGB5P18084 799 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 UBA1P22314 1058 aaKnown RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 RTP1P59025 263 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 IRX5P78411 483 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 ARHGAP4P98171 946 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 PURAQ00577 322 aaKnown RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 SP2Q02086 613 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 MTMR1Q13613 665 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 DGKDQ16760 1214 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 CEP55Q53EZ4 464 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 JAKMIP3Q5VZ66 844 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 METTL7BQ6UX53 244 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 CXCL17Q6UXB2 119 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 ANKRD33Q7Z3H0 272 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 BLIDQ8IZY5 108 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 CRYGNQ8WXF5 182 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 MTG1Q9BT17 334 aaPredicted RBP11.55□□□□□ -0.56
TTC39A-213ENST00000524442 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 TMEM260Q9NX78 707 aa11.55□□□□□ -0.56
TTC39A-213ENST00000524442 DCDC2CA8MYV0 355 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 ARVCFO00192 962 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 MEIS1O00470 390 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 MMP3P08254 477 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 MYL3P08590 195 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 FDPSP14324 419 aaKnown RBP11.54□□□□□ -0.56
TTC39A-213ENST00000524442 PTGS1P23219 599 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 ZNF76P36508 570 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 CDK7P50613 346 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 USP11P51784 963 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 HMGN5P82970 282 aaKnown RBP11.54□□□□□ -0.56
TTC39A-213ENST00000524442 SEMA3FQ13275 785 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 TRIM60Q495X7 471 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 C7orf61Q8IZ16 206 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 SLC43A3Q8NBI5 491 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 SPATA33Q96N06 139 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 ALG1Q9BT22 464 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 PHF20Q9BVI0 1012 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 KIAA1217Q5T5P2 1943 aa11.54□□□□□ -0.56
TTC39A-213ENST00000524442 H0YGN5 161 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 M0R2N6 131 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
TTC39A-213ENST00000524442 CIITAP33076 1130 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-213ENST00000524442 TLE2Q04725 743 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 PTPN11Q06124 597 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-213ENST00000524442 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 TRIM29Q14134 588 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 KRT25Q7Z3Z0 450 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 CCDC83Q8IWF9 413 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
TTC39A-213ENST00000524442 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 KATNAL1Q9BW62 490 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 BRMS1Q9HCU9 246 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 PRKAG2Q9UGJ0 569 aa11.53□□□□□ -0.56
TTC39A-213ENST00000524442 TLR3O15455 904 aaKnown RBP11.52□□□□□ -0.57
TTC39A-213ENST00000524442 KCNA2P16389 499 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 NPY5RQ15761 445 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 HSDL1Q3SXM5 330 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 NFRKBQ6P4R8 1299 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 CYFIP1Q7L576 1253 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 RASGRP4Q8TDF6 673 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 NFASCO94856 1347 aa11.52□□□□□ -0.57
TTC39A-213ENST00000524442 IGLV3-22A0A075B6J6 115 aa11.51□□□□□ -0.57
TTC39A-213ENST00000524442 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
TTC39A-213ENST00000524442 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
TTC39A-213ENST00000524442 ADAMTS3O15072 1205 aa11.51□□□□□ -0.57
TTC39A-213ENST00000524442 JAK2O60674 1132 aa11.51□□□□□ -0.57
TTC39A-213ENST00000524442 PQBP1O60828 265 aaKnown RBP11.51□□□□□ -0.57
TTC39A-213ENST00000524442 ATP9AO75110 1047 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms