RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 SUPT16HQ9Y5B9 1047 aaKnown RBP13.71□□□□□ -0.21
SPARC-206ENST00000524277 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
SPARC-206ENST00000524277 KIAA1217Q5T5P2 1943 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 EMSYQ7Z589 1322 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 RGS20O76081 388 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 CKBP12277 381 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 MYOGP15173 224 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 KIF5BP33176 963 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 GNAQP50148 359 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 PTH1RQ03431 593 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 NEDD9Q14511 834 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 XRRA1Q6P2D8 792 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 CTAGE1Q96RT6 745 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 ALG1Q9BT22 464 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 PRDM6Q9NQX0 595 aa13.7□□□□□ -0.22
SPARC-206ENST00000524277 NCOR1O75376 2440 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 TLL1O43897 1013 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 DDAH1O94760 285 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 GGPS1O95749 300 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
SPARC-206ENST00000524277 ICAM3P32942 547 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 IKBKEQ14164 716 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
SPARC-206ENST00000524277 CASC1Q6TDU7 716 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 CTCFLQ8NI51 663 aaPredicted RBP13.69□□□□□ -0.22
SPARC-206ENST00000524277 IGDCC4Q8TDY8 1250 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
SPARC-206ENST00000524277 CUL5Q93034 780 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 LMCD1Q9NZU5 365 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 CHD7Q9P2D1 2997 aa13.69□□□□□ -0.22
SPARC-206ENST00000524277 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 CYTH3O43739 400 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 CAND2O75155 1236 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 GNAT1P11488 350 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
SPARC-206ENST00000524277 WDR5P61964 334 aaKnown RBP13.68□□□□□ -0.22
SPARC-206ENST00000524277 TAP1Q03518 808 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 GIMAP8Q8ND71 665 aaPredicted RBP13.68□□□□□ -0.22
SPARC-206ENST00000524277 PPP1R13LQ8WUF5 828 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
SPARC-206ENST00000524277 RAD9AQ99638 391 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 COG5Q9UP83 839 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 MTCH2Q9Y6C9 303 aa13.68□□□□□ -0.22
SPARC-206ENST00000524277 C17orf102A2RUQ5 167 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 H3BRB1 525 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 NBNO60934 754 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 ZNF286BP0CG31 522 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 CALM1P0DP23 149 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 CALM2P0DP24 149 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 CALM3P0DP25 149 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 SP2Q02086 613 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 GPNMBQ14956 572 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 TRIM71Q2Q1W2 868 aaKnown RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 METTL7BQ6UX53 244 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 SERINC5Q86VE9 423 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 MB21D2Q8IYB1 491 aaPredicted RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 INPP4AQ96PE3 977 aaPredicted RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 C16orf70Q9BSU1 422 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 SCN5AQ14524 2016 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
SPARC-206ENST00000524277 TRIP12Q14669 1992 aaPredicted RBP13.67□□□□□ -0.22
SPARC-206ENST00000524277 GBF1Q92538 1859 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 TRANK1O15050 2925 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 RSPH10B2B2RC85 870 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 FIBPO43427 364 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 LGR5O75473 907 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 GJB5O95377 273 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 RSPH10BP0C881 870 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 HOXC8P31273 242 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 MCM5P33992 734 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 ZNF618Q5T7W0 954 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 NLRX1Q86UT6 975 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 TEX2Q8IWB9 1127 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 ZNF654Q8IZM8 581 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 IL31RAQ8NI17 732 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 ARNTL2Q8WYA1 636 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 ATP6V0A1Q93050 837 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 SENP2Q9HC62 589 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 ZNF215Q9UL58 517 aaPredicted RBP13.66□□□□□ -0.22
SPARC-206ENST00000524277 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
SPARC-206ENST00000524277 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
SPARC-206ENST00000524277 CCDC69A6NI79 296 aa13.65□□□□□ -0.22
SPARC-206ENST00000524277 LGALS2P05162 132 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms