RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PURAQ00577 322 aaKnown RBP13.69□□□□□ -0.22
CLN8-207ENST00000524258 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
CLN8-207ENST00000524258 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 KCNV1Q6PIU1 500 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 CPLX2Q6PUV4 134 aaKnown RBP13.69□□□□□ -0.22
CLN8-207ENST00000524258 DAGLBQ8NCG7 672 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 CCDC12Q8WUD4 166 aaPredicted RBP13.69□□□□□ -0.22
CLN8-207ENST00000524258 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 DPF3Q92784 378 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 KAT2BQ92831 832 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 PHF20Q9BVI0 1012 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 C6orf50Q9HD87 102 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 JADE2Q9NQC1 790 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 PCDH10Q9P2E7 1040 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 ORC3Q9UBD5 711 aaPredicted RBP13.69□□□□□ -0.22
CLN8-207ENST00000524258 MRVI1Q9Y6F6 885 aa13.69□□□□□ -0.22
CLN8-207ENST00000524258 IGLV3-22A0A075B6J6 115 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 MEIS1O00470 390 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 FIBPO43427 364 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 CDKL5O76039 1030 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 MMP3P08254 477 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 KCNA2P16389 499 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 GNA11P29992 359 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 ARHGAP4P98171 946 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 TRIM60Q495X7 471 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 ANKRD33Q7Z3H0 272 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 GPRASP2Q96D09 838 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 MXRA8Q9BRK3 442 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 PRO3102Q9H379 93 aa13.68□□□□□ -0.22
CLN8-207ENST00000524258 FAM86B1E9PN63 330 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 EVI5O60447 810 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 CABYRO75952 493 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 GGPS1O95749 300 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 FAM86B2P0C5J1 330 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 CIITAP33076 1130 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 CPT1AP50416 773 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 TLE2Q04725 743 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 LAMC2Q13753 1193 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
CLN8-207ENST00000524258 C7orf61Q8IZ16 206 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 REXO1Q8N1G1 1221 aaKnown RBP13.67□□□□□ -0.22
CLN8-207ENST00000524258 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 CCDC148Q8NFR7 591 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 PPTC7Q8NI37 304 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 LENG9Q96B70 501 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 ZSCAN31Q96LW9 406 aaPredicted RBP13.67□□□□□ -0.22
CLN8-207ENST00000524258 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 PCDHA4Q9UN74 947 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 KCNJ14Q9UNX9 436 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
CLN8-207ENST00000524258 TRIM43BA6NCK2 446 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 ARVCFO00192 962 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 HAS3O00219 553 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 MAFGO15525 162 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 ARP10275 920 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 NLRP5P59047 1200 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 PSMC6P62333 389 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 FAAP100Q0VG06 881 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 GNPTABQ3T906 1256 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 CEP55Q53EZ4 464 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 MCTP2Q6DN12 878 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 GALNT17Q6IS24 598 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 CCDC83Q8IWF9 413 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 DHX37Q8IY37 1157 aaKnown RBP13.66□□□□□ -0.22
CLN8-207ENST00000524258 BLIDQ8IZY5 108 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 TNFRSF25Q93038 417 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 TRIM43Q96BQ3 446 aaPredicted RBP13.66□□□□□ -0.22
CLN8-207ENST00000524258 GLT1D1Q96MS3 346 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
CLN8-207ENST00000524258 UPF2Q9HAU5 1272 aaKnown RBP13.66□□□□□ -0.22
CLN8-207ENST00000524258 PDLIM7Q9NR12 457 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 SH2B1Q9NRF2 756 aaPredicted RBP13.66□□□□□ -0.22
CLN8-207ENST00000524258 KCNH7Q9NS40 1196 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
CLN8-207ENST00000524258 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 ZEB2O60315 1214 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 SORBS3O60504 671 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 KPNA6O60684 536 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 CD4P01730 458 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 ITGB8P26012 769 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 ITGA7Q13683 1181 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 EARS2Q5JPH6 523 aaKnown RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 METTL7BQ6UX53 244 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 CYFIP1Q7L576 1253 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 NLRX1Q86UT6 975 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
CLN8-207ENST00000524258 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
CLN8-207ENST00000524258 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms