RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 F8W031 263 aaPredicted RBP5.42□□□□□ -1.54
SKP1-212ENST00000523966 WNT9AO14904 365 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 PPP1R11O60927 126 aaPredicted RBP5.42□□□□□ -1.54
SKP1-212ENST00000523966 GLRX3O76003 335 aaKnown RBP5.42□□□□□ -1.54
SKP1-212ENST00000523966 CKMP06732 381 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 COL6A2P12110 1019 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 KCNA6P17658 529 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 PDE6BP35913 854 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 CEBPAP49715 358 aaPredicted RBP5.42□□□□□ -1.54
SKP1-212ENST00000523966 IL2P60568 153 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 OCRLQ01968 901 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 STRN3Q13033 797 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 NR1I3Q14994 352 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 GPR19Q15760 415 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 STEAP3Q658P3 488 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 PKN3Q6P5Z2 889 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 ARHGAP36Q6ZRI8 547 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 OTOP3Q7RTS5 596 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 RNF180Q86T96 592 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 C11orf74Q86VG3 221 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 ABI1Q8IZP0 508 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 NLGN4XQ8N0W4 816 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 CISD2Q8N5K1 135 aaKnown RBP5.42□□□□□ -1.54
SKP1-212ENST00000523966 NETO2Q8NC67 525 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 FLAD1Q8NFF5 587 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 GPATCH3Q96I76 525 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 TTC1Q99614 292 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 SLC6A17Q9H1V8 727 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 SLC6A20Q9NP91 592 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 C19orf73Q9NVV2 129 aa5.42□□□□□ -1.54
SKP1-212ENST00000523966 SLC12A8A0AV02 714 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 CBX4O00257 560 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 HGSO14964 777 aaPredicted RBP5.41□□□□□ -1.54
SKP1-212ENST00000523966 BRINP1O60477 761 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 HIP1RO75146 1068 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 CYBBP04839 570 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 MSL3P1P0C860 447 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 PDE6AP16499 860 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 AMPD3Q01432 767 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 KIR3DS1Q14943 382 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 RAB3GAP1Q15042 981 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 DHCR24Q15392 516 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 KCNMB1Q16558 191 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 TIGD5Q53EQ6 642 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 OLFML2BQ68BL8 750 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 ABHD17CQ6PCB6 329 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 PAQR3Q6TCH7 311 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 ATG4DQ86TL0 474 aaPredicted RBP5.41□□□□□ -1.54
SKP1-212ENST00000523966 OSTM1Q86WC4 334 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 PASD1Q8IV76 773 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 TRIM48Q8IWZ4 208 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 Q8N1Y9 231 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 CHST14Q8NCH0 376 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 PIP4K2CQ8TBX8 421 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 SEC14L1Q92503 715 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 MTFR1LQ9H019 292 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 RNF32Q9H0A6 362 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 DSEQ9UL01 958 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 ATP8A1Q9Y2Q0 1164 aa5.41□□□□□ -1.54
SKP1-212ENST00000523966 YBX2Q9Y2T7 364 aaKnown RBP5.41□□□□□ -1.54
SKP1-212ENST00000523966 PTPDC1A2A3K4 754 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 OR14I1A6ND48 311 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 NOTOA8MTQ0 251 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 NUDT19A8MXV4 375 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 H7C1D1 291 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 ABLIM1O14639 778 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 KRT37O76014 449 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 ZBTB7AO95365 584 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 SLC6A11P48066 632 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 GALK1P51570 392 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 LACTBP83111 547 aaPredicted RBP5.4□□□□□ -1.54
SKP1-212ENST00000523966 ZNF174Q15697 407 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 ADGRF1Q5T601 910 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 OVCH1Q7RTY7 1134 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 PHOSPHO1Q8TCT1 267 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.4□□□□□ -1.54
SKP1-212ENST00000523966 SCYL1Q96KG9 808 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 SMOC1Q9H4F8 434 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 IFT22Q9H7X7 185 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 B4GALT6Q9UBX8 382 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 CBLCQ9ULV8 474 aa5.4□□□□□ -1.54
SKP1-212ENST00000523966 ZC3H12DA2A288 527 aaKnown RBP5.39□□□□□ -1.55
SKP1-212ENST00000523966 SRGAP3O43295 1099 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 ZEB2O60315 1214 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 F2P00734 622 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 DBHP09172 617 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 GLI4P10075 376 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 CDK11BP21127 795 aaKnown RBP5.39□□□□□ -1.55
SKP1-212ENST00000523966 KPNA1P52294 538 aaPredicted RBP5.39□□□□□ -1.55
SKP1-212ENST00000523966 JAM2P57087 298 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 SLC9A5Q14940 896 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 CYP4F22Q6NT55 531 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 MPZL3Q6UWV2 235 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 MILR1Q7Z6M3 343 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 DDX42Q86XP3 938 aaKnown RBP eCLIP5.39□□□□□ -1.55
SKP1-212ENST00000523966 PTRH1Q86Y79 214 aaKnown RBP5.39□□□□□ -1.55
SKP1-212ENST00000523966 NXPE1Q8N323 547 aa5.39□□□□□ -1.55
SKP1-212ENST00000523966 WDR66Q8TBY9 1149 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms