RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 STAM2O75886 525 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 GGPS1O95749 300 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 GH1P01241 217 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 ARP10275 920 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 COL6A1P12109 1028 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 CST5P28325 142 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-224ENST00000523873 ICAM3P32942 547 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 ZNF76P36508 570 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 ATN1P54259 1190 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-224ENST00000523873 HMGN5P82970 282 aaKnown RBP14.63□□□□□ -0.07
VEGFA-224ENST00000523873 NR5A1Q13285 461 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 FSCN1Q16658 493 aaKnown RBP14.63□□□□□ -0.07
VEGFA-224ENST00000523873 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 EARS2Q5JPH6 523 aaKnown RBP14.63□□□□□ -0.07
VEGFA-224ENST00000523873 XRRA1Q6P2D8 792 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 NLRX1Q86UT6 975 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 TEX2Q8IWB9 1127 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 TBCKQ8TEA7 893 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 AFG1LQ8WV93 481 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 C8orf76Q96K31 380 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 MXRA8Q9BRK3 442 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 SPC25Q9HBM1 224 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 JADE2Q9NQC1 790 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 FOXD4L1Q9NU39 408 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 PHF24Q9UPV7 400 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 Q9Y3F1 56 aa14.63□□□□□ -0.07
VEGFA-224ENST00000523873 A0A1W2PQ45 241 aaPredicted RBP14.62□□□□□ -0.07
VEGFA-224ENST00000523873 A0A1W2PQY0 241 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 FAM86B1E9PN63 330 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 ATP9AO75110 1047 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 MMP1P03956 469 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 ASGR1P07306 291 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 MYL3P08590 195 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 FAM86B2P0C5J1 330 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 GJB2P29033 226 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 KRT2P35908 639 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 ACLYP53396 1101 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 NKX3-2P78367 333 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 TRIM29Q14134 588 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 INF2Q27J81 1249 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 GALNT17Q6IS24 598 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 CXCL17Q6UXB2 119 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 DHX37Q8IY37 1157 aaKnown RBP14.62□□□□□ -0.07
VEGFA-224ENST00000523873 PPP1R13LQ8WUF5 828 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 GPRASP2Q96D09 838 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
VEGFA-224ENST00000523873 BTBD18B2RXH4 712 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 MMP3P08254 477 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CYP3A4P08684 503 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CAPN2P17655 700 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 SP4Q02446 784 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 MTMR1Q13613 665 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CUL4AQ13619 759 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 LRRC26Q2I0M4 334 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CEP55Q53EZ4 464 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CELF3Q5SZQ8 465 aaKnown RBP14.61□□□□□ -0.07
VEGFA-224ENST00000523873 MCTP2Q6DN12 878 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 PIK3AP1Q6ZUJ8 805 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 CYFIP1Q7L576 1253 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 KRT25Q7Z3Z0 450 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 DIS3L2Q8IYB7 885 aaKnown RBP14.61□□□□□ -0.07
VEGFA-224ENST00000523873 FAM177A1Q8N128 213 aaPredicted RBP14.61□□□□□ -0.07
VEGFA-224ENST00000523873 TNFRSF25Q93038 417 aa14.61□□□□□ -0.07
VEGFA-224ENST00000523873 IGLV3-22A0A075B6J6 115 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 CCDC194A0A1B0GVG4 234 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 K7ELQ4 463 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-224ENST00000523873 MEIS1O00470 390 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 TDP2O95551 362 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 KCNA2P16389 499 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 PSMC6P62333 389 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 MLLT1Q03111 559 aaPredicted RBP14.6□□□□□ -0.07
VEGFA-224ENST00000523873 NONOQ15233 471 aaKnown RBP eCLIP14.6□□□□□ -0.073e-6■■■□□ 16.3
VEGFA-224ENST00000523873 HSDL1Q3SXM5 330 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 KCNV1Q6PIU1 500 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 PCSK9Q8NBP7 692 aaKnown RBP14.6□□□□□ -0.07
VEGFA-224ENST00000523873 SPATA33Q96N06 139 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 TSEN34Q9BSV6 310 aaKnown RBP14.6□□□□□ -0.07
VEGFA-224ENST00000523873 MLXIPQ9HAP2 919 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 BRMS1Q9HCU9 246 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 KCNH7Q9NS40 1196 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
VEGFA-224ENST00000523873 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 MOXD2PA6NHM9 499 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 A6NJR5 290 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 DDX39AO00148 427 aaKnown RBP14.59□□□□□ -0.07
VEGFA-224ENST00000523873 TGFB3P10600 412 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 CPT1AP50416 773 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 PURAQ00577 322 aaKnown RBP14.59□□□□□ -0.07
VEGFA-224ENST00000523873 LAMC2Q13753 1193 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 PRR16Q569H4 304 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 SLC39A5Q6ZMH5 540 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 GJA10Q969M2 543 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 SNX21Q969T3 373 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 VTI1AQ96AJ9 217 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 AGO4Q9HCK5 861 aaKnown RBP14.59□□□□□ -0.07
VEGFA-224ENST00000523873 STARD7Q9NQZ5 370 aa14.59□□□□□ -0.07
VEGFA-224ENST00000523873 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms