RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 ZNF652Q9Y2D9 606 aa8.61□□□□□ -1.03
CPNE3-206ENST00000523469 TCRBV16S1A1N1A0A5B0 115 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 GSTA4O15217 222 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 GNAT1P11488 350 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 CYP4F22Q6NT55 531 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 PIP4K2CQ8TBX8 421 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 KCNN1Q92952 543 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 MBD1Q9UIS9 605 aaPredicted RBP8.6□□□□□ -1.03
CPNE3-206ENST00000523469 PALD1Q9ULE6 856 aa8.6□□□□□ -1.03
CPNE3-206ENST00000523469 TADA3O75528 432 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 ST5P78524 1137 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 ZNF200P98182 395 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-206ENST00000523469 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 HABP4Q5JVS0 413 aaKnown RBP8.59□□□□□ -1.03
CPNE3-206ENST00000523469 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-206ENST00000523469 PHOSPHO1Q8TCT1 267 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 PANK1Q8TE04 598 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 ALG3Q92685 438 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 NINJ1Q92982 152 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 SMOC1Q9H4F8 434 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 PLAAQ9Y263 795 aa8.59□□□□□ -1.03
CPNE3-206ENST00000523469 THOC2Q8NI27 1593 aaKnown RBP8.58□□□□□ -1.04
CPNE3-206ENST00000523469 B4E1Z4 1266 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 ASLP04424 464 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 SRGAP2CP0DJJ0 459 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 TAF7LQ5H9L4 462 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 C16orf59Q7L2K0 433 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 MILR1Q7Z6M3 343 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 PPP1R16BQ96T49 567 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 SLC38A3Q99624 504 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 INTS7Q9NVH2 962 aaKnown RBP8.58□□□□□ -1.04
CPNE3-206ENST00000523469 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
CPNE3-206ENST00000523469 NUB1Q9Y5A7 615 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 PCDHB4Q9Y5E5 795 aa8.58□□□□□ -1.04
CPNE3-206ENST00000523469 IRS2Q9Y4H2 1338 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 SMARCA5O60264 1052 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-206ENST00000523469 DNAJC8O75937 253 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-206ENST00000523469 CLSTN1O94985 981 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 NPTXRO95502 500 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 TMEM253P0C7T8 217 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 PYGMP11217 842 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 COL6A2P12110 1019 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 FBLN1P23142 703 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 GLDCP23378 1020 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 IGFALSP35858 605 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 TXKP42681 527 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 CDR1P51861 262 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 DLG4P78352 724 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
CPNE3-206ENST00000523469 BHLHE22Q8NFJ8 381 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-206ENST00000523469 SGPP1Q9BX95 441 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 RNF38Q9H0F5 515 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 GCM1Q9NP62 436 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 CATSPERZQ9NTU4 200 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 MYOTQ9UBF9 498 aa8.57□□□□□ -1.04
CPNE3-206ENST00000523469 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 ETV2O00321 342 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 N4BP3O15049 544 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 CKMP06732 381 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 SDSP20132 328 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 GPR19Q15760 415 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 C21orf62-AS1Q17RA5 79 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 ZNF648Q5T619 568 aaPredicted RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 NIM1KQ8IY84 436 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 UHMK1Q8TAS1 419 aaKnown RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 MZB1Q8WU39 189 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 CELF4Q9BZC1 486 aaKnown RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 BCAS3Q9H6U6 928 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 PCDHA5Q9Y5H7 936 aa8.56□□□□□ -1.04
CPNE3-206ENST00000523469 TNPO3Q9Y5L0 923 aaKnown RBP8.56□□□□□ -1.04
CPNE3-206ENST00000523469 TCRBV5S2A0A599 114 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 NKRFO15226 690 aaKnown RBP eCLIP8.55□□□□□ -1.04
CPNE3-206ENST00000523469 OPA1O60313 960 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 ASGR2P07307 311 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 MED14OSP0DP75 135 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 NCAM1P13591 858 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 KCNA6P17658 529 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 PFKLP17858 780 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 PMLP29590 882 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 DNM2P50570 870 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 CRY1Q16526 586 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 MIB1Q86YT6 1006 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 CPA5Q8WXQ8 436 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 SLKQ9H2G2 1235 aaPredicted RBP8.55□□□□□ -1.04
CPNE3-206ENST00000523469 ASH2LQ9UBL3 628 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 DSEQ9UL01 958 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 CBLCQ9ULV8 474 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 PLA2G2DQ9UNK4 145 aa8.55□□□□□ -1.04
CPNE3-206ENST00000523469 NFIBO00712 420 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 PDE6AP16499 860 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 FLT3P36888 993 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 EPHB3P54753 998 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 ZCCHC8Q6NZY4 707 aaKnown RBP8.54□□□□□ -1.04
CPNE3-206ENST00000523469 ABHD17CQ6PCB6 329 aa8.54□□□□□ -1.04
CPNE3-206ENST00000523469 DDX53Q86TM3 631 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms