RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 COL4A4P53420 1690 aaPredicted RBP30.17■■■□□ 2.42
PVT1-219ENST00000523427 BRWD1Q9NSI6 2320 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 HAS3O00219 553 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 ERVK-21P61565 698 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 HIC1Q14526 733 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 MBTPS1Q14703 1052 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 IMMTQ16891 758 aaKnown RBP30.17■■■□□ 2.42
PVT1-219ENST00000523427 KIAA1217Q5T5P2 1943 aa30.17■■■□□ 2.42
PVT1-219ENST00000523427 OPLAHO14841 1288 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 GGPS1O95749 300 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 THPOP40225 353 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 HSDL1Q3SXM5 330 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 TMEM31Q5JXX7 168 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 TRAF7Q6Q0C0 670 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 MYOCDQ8IZQ8 938 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 PDCD2LQ9BRP1 358 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 LMCD1Q9NZU5 365 aa30.16■■■□□ 2.42
PVT1-219ENST00000523427 FAM86C2PA6NEL3 165 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 EFCAB14O75071 495 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 LGR5O75473 907 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 IFIT1BQ5T764 474 aaKnown RBP30.15■■■□□ 2.42
PVT1-219ENST00000523427 MYSM1Q5VVJ2 828 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 DBF4BQ8NFT6 615 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 C17orf80Q9BSJ5 609 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 PCDHA1Q9Y5I3 950 aa30.15■■■□□ 2.42
PVT1-219ENST00000523427 MYH6P13533 1939 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 KLRF2D3W0D1 207 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 PPP1R11O60927 126 aaPredicted RBP30.14■■■□□ 2.42
PVT1-219ENST00000523427 PPFIA4O75335 1185 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 RGS20O76081 388 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 HSD17B4P51659 736 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 CELF3Q5SZQ8 465 aaKnown RBP30.14■■■□□ 2.42
PVT1-219ENST00000523427 HOMER1Q86YM7 354 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 PLEKHM2Q8IWE5 1019 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 IL31RAQ8NI17 732 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 KRT23Q9C075 422 aa30.14■■■□□ 2.42
PVT1-219ENST00000523427 UBE2ZQ9H832 354 aaPredicted RBP30.14■■■□□ 2.42
PVT1-219ENST00000523427 MYH7BA7E2Y1 1941 aa30.14■■■□□ 2.41
PVT1-219ENST00000523427 FCHSD1Q86WN1 690 aa30.13■■■□□ 2.41
PVT1-219ENST00000523427 GPKOWQ92917 476 aaPredicted RBP eCLIP30.13■■■□□ 2.41
PVT1-219ENST00000523427 MLXIPQ9HAP2 919 aa30.13■■■□□ 2.41
PVT1-219ENST00000523427 CD320Q9NPF0 282 aa30.13■■■□□ 2.41
PVT1-219ENST00000523427 HCN4Q9Y3Q4 1203 aa30.13■■■□□ 2.41
PVT1-219ENST00000523427 RSPH10B2B2RC85 870 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 AMHP03971 560 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 RSPH10BP0C881 870 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 KCNA5P22460 613 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 NT5C2P49902 561 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 SP2Q02086 613 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 PGM5Q15124 567 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 CHD1LQ86WJ1 897 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 FBXO22Q8NEZ5 403 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 CTNNA3Q9UI47 895 aa30.12■■■□□ 2.41
PVT1-219ENST00000523427 UBA1P22314 1058 aaKnown RBP30.11■■■□□ 2.41
PVT1-219ENST00000523427 VSIG10LQ86VR7 867 aa30.11■■■□□ 2.41
PVT1-219ENST00000523427 ATP6V0A1Q93050 837 aa30.11■■■□□ 2.41
PVT1-219ENST00000523427 DSCC1Q9BVC3 393 aa30.11■■■□□ 2.41
PVT1-219ENST00000523427 RWDD1Q9H446 243 aaPredicted RBP30.11■■■□□ 2.41
PVT1-219ENST00000523427 INSL6Q9Y581 213 aa30.11■■■□□ 2.41
PVT1-219ENST00000523427 ZBTB5O15062 677 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 KCNV1Q6PIU1 500 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 STOX1Q6ZVD7 989 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 SMC5Q8IY18 1101 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 BCAS3Q9H6U6 928 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 CNNM2Q9H8M5 875 aa30.1■■■□□ 2.41
PVT1-219ENST00000523427 C17orf102A2RUQ5 167 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 UPP2O95045 317 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 EMSYQ7Z589 1322 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 SERINC5Q86VE9 423 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 C16orf70Q9BSU1 422 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 MAD2L2Q9UI95 211 aa30.09■■■□□ 2.41
PVT1-219ENST00000523427 LAMA4Q16363 1823 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 GCOM1H8Y6P7 765 aaPredicted RBP30.08■■■□□ 2.41
PVT1-219ENST00000523427 HIP1O00291 1037 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 CTSHP09668 335 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 POLR2MP0CAP2 368 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 HOXD8P13378 290 aaPredicted RBP30.08■■■□□ 2.41
PVT1-219ENST00000523427 CCND2P30279 289 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 CYB5R4Q7L1T6 521 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 PIGSQ96S52 555 aa30.08■■■□□ 2.41
PVT1-219ENST00000523427 H3BRB1 525 aa30.07■■■□□ 2.4
PVT1-219ENST00000523427 EP400NLQ6ZTU2 488 aa30.07■■■□□ 2.4
PVT1-219ENST00000523427 OSBPL3Q9H4L5 887 aa30.07■■■□□ 2.4
PVT1-219ENST00000523427 TUT1Q9H6E5 874 aaKnown RBP30.07■■■□□ 2.4
PVT1-219ENST00000523427 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP30.06■■■□□ 2.4
PVT1-219ENST00000523427 TREHO43280 583 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 IGHDP01880 384 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 SMIM10L2AP0DMW4 78 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 SMIM10L2BP0DMW5 78 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 SSTR3P32745 418 aaPredicted RBP30.06■■■□□ 2.4
PVT1-219ENST00000523427 SEC23AQ15436 765 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.06■■■□□ 2.4
PVT1-219ENST00000523427 PIBF1Q8WXW3 757 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 MTMR8Q96EF0 704 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 C11orf16Q9NQ32 467 aa30.06■■■□□ 2.4
PVT1-219ENST00000523427 MAP3K20Q9NYL2 800 aaKnown RBP30.06■■■□□ 2.4
PVT1-219ENST00000523427 NOP56O00567 594 aaKnown RBP30.05■■■□□ 2.4
PVT1-219ENST00000523427 IL9P15248 144 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 GHRHRQ02643 423 aa30.05■■■□□ 2.4
PVT1-219ENST00000523427 NUCB1Q02818 461 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms